Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PFDN1O60925 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.07■□□□□ 0
PFDN1O60925 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PFDN1O60925 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PFDN1O60925 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
PFDN1O60925 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.07■□□□□ 0
PFDN1O60925 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15.07■□□□□ 0
PFDN1O60925 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PFDN1O60925 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.07■□□□□ 0
PFDN1O60925 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PFDN1O60925 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.07■□□□□ 0
PFDN1O60925 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.07■□□□□ 0
PFDN1O60925 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PFDN1O60925 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PFDN1O60925 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PFDN1O60925 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PFDN1O60925 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.07■□□□□ 0
PFDN1O60925 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PFDN1O60925 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.07■□□□□ 0
PFDN1O60925 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PFDN1O60925 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
PFDN1O60925 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PFDN1O60925 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PFDN1O60925 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.06■□□□□ 0
PFDN1O60925 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PFDN1O60925 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.06■□□□□ 0
PFDN1O60925 AC099343.3-201ENST00000605834 2503 ntBASIC15.06■□□□□ 0
PFDN1O60925 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PFDN1O60925 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC15.06■□□□□ 0
PFDN1O60925 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.06■□□□□ 0
PFDN1O60925 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
PFDN1O60925 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PFDN1O60925 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.06■□□□□ 0
PFDN1O60925 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.06■□□□□ 0
PFDN1O60925 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.06■□□□□ 0
PFDN1O60925 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.06■□□□□ 0
PFDN1O60925 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC15.06■□□□□ 0
PFDN1O60925 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.06■□□□□ 0
PFDN1O60925 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.06■□□□□ 0
PFDN1O60925 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15.06■□□□□ 0
PFDN1O60925 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.06■□□□□ 0
PFDN1O60925 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PFDN1O60925 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.06■□□□□ 0
PFDN1O60925 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.06■□□□□ 0
PFDN1O60925 Z82170.1-201ENST00000625081 3192 ntBASIC15.06■□□□□ 0
PFDN1O60925 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC15.05■□□□□ 0
PFDN1O60925 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PFDN1O60925 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC15.05■□□□□ 0
PFDN1O60925 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
PFDN1O60925 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.05■□□□□ 0
PFDN1O60925 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.05■□□□□ 0
PFDN1O60925 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC15.05■□□□□ 0
PFDN1O60925 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC15.05■□□□□ -0
PFDN1O60925 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PFDN1O60925 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PFDN1O60925 AP000593.1-201ENST00000393668 712 ntBASIC15.05■□□□□ -0
PFDN1O60925 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC15.05■□□□□ -0
PFDN1O60925 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15.05■□□□□ -0
PFDN1O60925 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC15.05■□□□□ -0
PFDN1O60925 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
PFDN1O60925 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PFDN1O60925 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.05■□□□□ -0
PFDN1O60925 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PFDN1O60925 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
PFDN1O60925 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.05■□□□□ -0
PFDN1O60925 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.05■□□□□ -0
PFDN1O60925 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
PFDN1O60925 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
PFDN1O60925 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
PFDN1O60925 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.05■□□□□ -0
PFDN1O60925 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.05■□□□□ -0
PFDN1O60925 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms