Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.37■□□□□ 0.37
TSPAN3O60637 AC140658.5-201ENST00000438532 169 ntBASIC17.37■□□□□ 0.37
TSPAN3O60637 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.37■□□□□ 0.37
TSPAN3O60637 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TSPAN3O60637 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TSPAN3O60637 AC112191.1-201ENST00000523689 701 ntBASIC17.37■□□□□ 0.37
TSPAN3O60637 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
TSPAN3O60637 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.37■□□□□ 0.37
TSPAN3O60637 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.37■□□□□ 0.37
TSPAN3O60637 MPDU1-223ENST00000582151 728 ntBASIC17.37■□□□□ 0.37
TSPAN3O60637 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TSPAN3O60637 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TSPAN3O60637 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.37■□□□□ 0.37
TSPAN3O60637 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.37■□□□□ 0.37
TSPAN3O60637 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TSPAN3O60637 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TSPAN3O60637 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TSPAN3O60637 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.37■□□□□ 0.37
TSPAN3O60637 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TSPAN3O60637 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.37■□□□□ 0.37
TSPAN3O60637 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TSPAN3O60637 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TSPAN3O60637 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
TSPAN3O60637 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TSPAN3O60637 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.37■□□□□ 0.37
TSPAN3O60637 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TSPAN3O60637 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.37■□□□□ 0.37
TSPAN3O60637 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
TSPAN3O60637 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TSPAN3O60637 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TSPAN3O60637 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TSPAN3O60637 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TSPAN3O60637 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TSPAN3O60637 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TSPAN3O60637 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TSPAN3O60637 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.36■□□□□ 0.37
TSPAN3O60637 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.36■□□□□ 0.37
TSPAN3O60637 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.36■□□□□ 0.37
TSPAN3O60637 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TSPAN3O60637 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TSPAN3O60637 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TSPAN3O60637 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TSPAN3O60637 PMS2P2-201ENST00000425039 1128 ntBASIC17.36■□□□□ 0.37
TSPAN3O60637 AP006288.1-201ENST00000446065 395 ntBASIC17.36■□□□□ 0.37
TSPAN3O60637 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.36■□□□□ 0.37
TSPAN3O60637 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.36■□□□□ 0.37
TSPAN3O60637 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TSPAN3O60637 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.36■□□□□ 0.37
TSPAN3O60637 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.36■□□□□ 0.37
TSPAN3O60637 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
TSPAN3O60637 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TSPAN3O60637 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TSPAN3O60637 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TSPAN3O60637 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.36■□□□□ 0.37
TSPAN3O60637 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TSPAN3O60637 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TSPAN3O60637 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TSPAN3O60637 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.36■□□□□ 0.37
TSPAN3O60637 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TSPAN3O60637 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TSPAN3O60637 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TSPAN3O60637 AC131009.4-201ENST00000624048 1740 ntBASIC17.35■□□□□ 0.37
TSPAN3O60637 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.35■□□□□ 0.37
TSPAN3O60637 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TSPAN3O60637 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TSPAN3O60637 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TSPAN3O60637 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TSPAN3O60637 AC060834.1-201ENST00000443027 2032 ntBASIC17.35■□□□□ 0.37
TSPAN3O60637 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
TSPAN3O60637 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TSPAN3O60637 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TSPAN3O60637 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TSPAN3O60637 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.35■□□□□ 0.37
TSPAN3O60637 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.35■□□□□ 0.37
TSPAN3O60637 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
TSPAN3O60637 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TSPAN3O60637 AC002056.1-201ENST00000395613 760 ntBASIC17.35■□□□□ 0.37
TSPAN3O60637 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.35■□□□□ 0.37
TSPAN3O60637 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.35■□□□□ 0.37
TSPAN3O60637 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TSPAN3O60637 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.35■□□□□ 0.37
TSPAN3O60637 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.35■□□□□ 0.37
TSPAN3O60637 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.35■□□□□ 0.37
TSPAN3O60637 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.35■□□□□ 0.37
TSPAN3O60637 AC124947.2-201ENST00000547118 1133 ntBASIC17.35■□□□□ 0.37
TSPAN3O60637 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
TSPAN3O60637 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.35■□□□□ 0.37
TSPAN3O60637 AC091167.2-201ENST00000579581 588 ntBASIC17.35■□□□□ 0.37
TSPAN3O60637 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TSPAN3O60637 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TSPAN3O60637 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TSPAN3O60637 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TSPAN3O60637 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TSPAN3O60637 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TSPAN3O60637 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TSPAN3O60637 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TSPAN3O60637 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.35■□□□□ 0.37
TSPAN3O60637 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.35■□□□□ 0.37
TSPAN3O60637 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TSPAN3O60637 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms