Protein–RNA interactions for Protein: O15534

PER1, Period circadian protein homolog 1, humanhuman

Predicted RBP Predictions only

Length 1,290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER1O15534 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PER1O15534 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
PER1O15534 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PER1O15534 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC22.72■■□□□ 1.23
PER1O15534 WASH6P-202ENST00000359512 1437 ntBASIC22.72■■□□□ 1.23
PER1O15534 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC22.72■■□□□ 1.23
PER1O15534 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC22.72■■□□□ 1.23
PER1O15534 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
PER1O15534 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PER1O15534 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
PER1O15534 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PER1O15534 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PER1O15534 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PER1O15534 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PER1O15534 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC22.71■■□□□ 1.23
PER1O15534 STOM-202ENST00000347359 870 ntTSL 2 BASIC22.71■■□□□ 1.23
PER1O15534 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PER1O15534 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PER1O15534 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PER1O15534 DHDH-204ENST00000523250 634 ntTSL 5 BASIC22.71■■□□□ 1.23
PER1O15534 RARRES2P8-201ENST00000566335 367 ntBASIC22.71■■□□□ 1.23
PER1O15534 AL138918.1-201ENST00000568306 659 ntBASIC22.71■■□□□ 1.23
PER1O15534 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC22.71■■□□□ 1.23
PER1O15534 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PER1O15534 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PER1O15534 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PER1O15534 AL161645.1-201ENST00000622716 1255 ntBASIC22.71■■□□□ 1.23
PER1O15534 AKAP8P1-201ENST00000434743 1349 ntBASIC22.71■■□□□ 1.23
PER1O15534 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC22.71■■□□□ 1.23
PER1O15534 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PER1O15534 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PER1O15534 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PER1O15534 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
PER1O15534 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
PER1O15534 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
PER1O15534 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC22.71■■□□□ 1.23
PER1O15534 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
PER1O15534 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PER1O15534 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC22.71■■□□□ 1.23
PER1O15534 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PER1O15534 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PER1O15534 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC22.7■■□□□ 1.22
PER1O15534 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PER1O15534 TFAMP1-201ENST00000412727 736 ntBASIC22.7■■□□□ 1.22
PER1O15534 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC22.7■■□□□ 1.22
PER1O15534 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
PER1O15534 AL513210.1-201ENST00000629608 234 ntBASIC22.7■■□□□ 1.22
PER1O15534 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC22.7■■□□□ 1.22
PER1O15534 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PER1O15534 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PER1O15534 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC22.7■■□□□ 1.22
PER1O15534 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC22.7■■□□□ 1.22
PER1O15534 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PER1O15534 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC22.7■■□□□ 1.22
PER1O15534 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
PER1O15534 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
PER1O15534 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
PER1O15534 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC22.69■■□□□ 1.22
PER1O15534 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC22.69■■□□□ 1.22
PER1O15534 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
PER1O15534 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC22.69■■□□□ 1.22
PER1O15534 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC22.69■■□□□ 1.22
PER1O15534 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
PER1O15534 ME2P1-201ENST00000426028 1970 ntBASIC22.69■■□□□ 1.22
PER1O15534 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PER1O15534 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PER1O15534 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC22.69■■□□□ 1.22
PER1O15534 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC22.69■■□□□ 1.22
PER1O15534 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PER1O15534 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
PER1O15534 FOXO1B-201ENST00000504678 1527 ntBASIC22.69■■□□□ 1.22
PER1O15534 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
PER1O15534 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PER1O15534 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PER1O15534 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC22.69■■□□□ 1.22
PER1O15534 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PER1O15534 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PER1O15534 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PER1O15534 NEK7-201ENST00000367383 586 ntTSL 2 BASIC22.69■■□□□ 1.22
PER1O15534 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
PER1O15534 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PER1O15534 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC22.69■■□□□ 1.22
PER1O15534 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
PER1O15534 CFL1-202ENST00000524553 860 ntTSL 2 BASIC22.69■■□□□ 1.22
PER1O15534 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PER1O15534 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC22.69■■□□□ 1.22
PER1O15534 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC22.69■■□□□ 1.22
PER1O15534 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC22.69■■□□□ 1.22
PER1O15534 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC22.69■■□□□ 1.22
PER1O15534 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC22.69■■□□□ 1.22
PER1O15534 AC084121.4-201ENST00000641598 221 ntBASIC22.69■■□□□ 1.22
PER1O15534 AF228730.8-201ENST00000642140 221 ntBASIC22.69■■□□□ 1.22
PER1O15534 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PER1O15534 AC099398.1-201ENST00000567919 2776 ntBASIC22.69■■□□□ 1.22
PER1O15534 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PER1O15534 AC005052.1-201ENST00000625181 2492 ntBASIC22.69■■□□□ 1.22
PER1O15534 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
PER1O15534 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC22.68■■□□□ 1.22
PER1O15534 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PER1O15534 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms