Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.1■□□□□ 0.81
FOXN1O15353 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.1■□□□□ 0.81
FOXN1O15353 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FOXN1O15353 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
FOXN1O15353 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXN1O15353 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXN1O15353 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXN1O15353 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXN1O15353 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXN1O15353 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FOXN1O15353 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FOXN1O15353 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FOXN1O15353 AC022144.1-201ENST00000602255 1580 ntBASIC20.09■□□□□ 0.81
FOXN1O15353 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXN1O15353 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FOXN1O15353 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.09■□□□□ 0.81
FOXN1O15353 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.09■□□□□ 0.81
FOXN1O15353 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FOXN1O15353 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FOXN1O15353 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXN1O15353 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
FOXN1O15353 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
FOXN1O15353 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXN1O15353 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXN1O15353 KLF4P1-201ENST00000412782 1185 ntBASIC20.09■□□□□ 0.81
FOXN1O15353 TSSK5P-201ENST00000423978 907 ntBASIC20.09■□□□□ 0.81
FOXN1O15353 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
FOXN1O15353 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC20.09■□□□□ 0.81
FOXN1O15353 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.09■□□□□ 0.81
FOXN1O15353 KRT8P23-201ENST00000560090 1207 ntBASIC20.09■□□□□ 0.81
FOXN1O15353 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.09■□□□□ 0.81
FOXN1O15353 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.09■□□□□ 0.81
FOXN1O15353 MIR4259-201ENST00000584466 101 ntBASIC20.09■□□□□ 0.81
FOXN1O15353 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
FOXN1O15353 ACTL9-202ENST00000612068 1252 ntBASIC20.09■□□□□ 0.81
FOXN1O15353 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
FOXN1O15353 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.09■□□□□ 0.81
FOXN1O15353 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.09■□□□□ 0.81
FOXN1O15353 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
FOXN1O15353 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.09■□□□□ 0.81
FOXN1O15353 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
FOXN1O15353 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
FOXN1O15353 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
FOXN1O15353 LINC00304-203ENST00000565008 1864 ntBASIC20.09■□□□□ 0.81
FOXN1O15353 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXN1O15353 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FOXN1O15353 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
FOXN1O15353 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXN1O15353 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXN1O15353 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FOXN1O15353 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
FOXN1O15353 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FOXN1O15353 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FOXN1O15353 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FOXN1O15353 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.08■□□□□ 0.81
FOXN1O15353 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FOXN1O15353 PI4KAP1-204ENST00000612579 1703 ntBASIC20.08■□□□□ 0.81
FOXN1O15353 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FOXN1O15353 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FOXN1O15353 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
FOXN1O15353 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
FOXN1O15353 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FOXN1O15353 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
FOXN1O15353 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
FOXN1O15353 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.08■□□□□ 0.81
FOXN1O15353 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
FOXN1O15353 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
FOXN1O15353 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC20.08■□□□□ 0.81
FOXN1O15353 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.08■□□□□ 0.81
FOXN1O15353 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC20.08■□□□□ 0.81
FOXN1O15353 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.08■□□□□ 0.81
FOXN1O15353 AL590560.3-201ENST00000623350 461 ntBASIC20.08■□□□□ 0.81
FOXN1O15353 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
FOXN1O15353 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
FOXN1O15353 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
FOXN1O15353 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
FOXN1O15353 AC100757.3-201ENST00000622361 1406 ntBASIC20.08■□□□□ 0.8
FOXN1O15353 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.08■□□□□ 0.8
FOXN1O15353 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
FOXN1O15353 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
FOXN1O15353 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXN1O15353 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXN1O15353 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXN1O15353 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXN1O15353 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
FOXN1O15353 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXN1O15353 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXN1O15353 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXN1O15353 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXN1O15353 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FOXN1O15353 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
FOXN1O15353 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXN1O15353 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXN1O15353 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXN1O15353 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXN1O15353 AL512384.1-201ENST00000406683 331 ntBASIC20.07■□□□□ 0.8
FOXN1O15353 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.07■□□□□ 0.8
FOXN1O15353 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXN1O15353 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FOXN1O15353 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms