Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PALM3A6NDB9 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PALM3A6NDB9 AC090340.1-201ENST00000620778 4980 ntBASIC19.41■□□□□ 0.7
PALM3A6NDB9 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PALM3A6NDB9 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PALM3A6NDB9 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PALM3A6NDB9 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.41■□□□□ 0.7
PALM3A6NDB9 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.41■□□□□ 0.7
PALM3A6NDB9 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PALM3A6NDB9 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.41■□□□□ 0.7
PALM3A6NDB9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PALM3A6NDB9 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PALM3A6NDB9 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.41■□□□□ 0.7
PALM3A6NDB9 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PALM3A6NDB9 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PALM3A6NDB9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
PALM3A6NDB9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PALM3A6NDB9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PALM3A6NDB9 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PALM3A6NDB9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PALM3A6NDB9 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PALM3A6NDB9 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PALM3A6NDB9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PALM3A6NDB9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PALM3A6NDB9 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PALM3A6NDB9 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PALM3A6NDB9 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PALM3A6NDB9 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.4■□□□□ 0.7
PALM3A6NDB9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PALM3A6NDB9 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.4■□□□□ 0.7
PALM3A6NDB9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PALM3A6NDB9 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.4■□□□□ 0.7
PALM3A6NDB9 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.4■□□□□ 0.7
PALM3A6NDB9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PALM3A6NDB9 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PALM3A6NDB9 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.4■□□□□ 0.7
PALM3A6NDB9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PALM3A6NDB9 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.4■□□□□ 0.7
PALM3A6NDB9 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PALM3A6NDB9 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.4■□□□□ 0.7
PALM3A6NDB9 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PALM3A6NDB9 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PALM3A6NDB9 AL355306.1-201ENST00000415580 579 ntBASIC19.4■□□□□ 0.7
PALM3A6NDB9 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.4■□□□□ 0.7
PALM3A6NDB9 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.4■□□□□ 0.7
PALM3A6NDB9 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.4■□□□□ 0.7
PALM3A6NDB9 AP006288.1-201ENST00000446065 395 ntBASIC19.4■□□□□ 0.7
PALM3A6NDB9 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.4■□□□□ 0.7
PALM3A6NDB9 AC004967.1-201ENST00000453589 447 ntBASIC19.4■□□□□ 0.7
PALM3A6NDB9 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PALM3A6NDB9 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.4■□□□□ 0.7
PALM3A6NDB9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.4■□□□□ 0.7
PALM3A6NDB9 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.4■□□□□ 0.7
PALM3A6NDB9 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.4■□□□□ 0.7
PALM3A6NDB9 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PALM3A6NDB9 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
PALM3A6NDB9 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.4■□□□□ 0.7
PALM3A6NDB9 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.4■□□□□ 0.7
PALM3A6NDB9 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PALM3A6NDB9 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PALM3A6NDB9 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PALM3A6NDB9 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PALM3A6NDB9 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PALM3A6NDB9 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.4■□□□□ 0.7
PALM3A6NDB9 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PALM3A6NDB9 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PALM3A6NDB9 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PALM3A6NDB9 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PALM3A6NDB9 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PALM3A6NDB9 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
PALM3A6NDB9 AL512652.2-201ENST00000625156 1716 ntBASIC19.39■□□□□ 0.7
PALM3A6NDB9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
PALM3A6NDB9 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PALM3A6NDB9 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.39■□□□□ 0.7
PALM3A6NDB9 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PALM3A6NDB9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PALM3A6NDB9 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PALM3A6NDB9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PALM3A6NDB9 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
PALM3A6NDB9 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PALM3A6NDB9 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.39■□□□□ 0.69
PALM3A6NDB9 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.39■□□□□ 0.69
PALM3A6NDB9 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.39■□□□□ 0.69
PALM3A6NDB9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PALM3A6NDB9 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.39■□□□□ 0.69
PALM3A6NDB9 AL671277.1-201ENST00000429656 993 ntBASIC19.39■□□□□ 0.69
PALM3A6NDB9 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PALM3A6NDB9 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PALM3A6NDB9 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PALM3A6NDB9 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PALM3A6NDB9 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.39■□□□□ 0.69
PALM3A6NDB9 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.39■□□□□ 0.69
PALM3A6NDB9 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.39■□□□□ 0.69
PALM3A6NDB9 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.39■□□□□ 0.69
PALM3A6NDB9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PALM3A6NDB9 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PALM3A6NDB9 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PALM3A6NDB9 AL691403.2-201ENST00000618460 490 ntBASIC19.39■□□□□ 0.69
PALM3A6NDB9 AL161645.1-201ENST00000622716 1255 ntBASIC19.39■□□□□ 0.69
PALM3A6NDB9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms