Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 MYCLP1-201ENST00000372451 1075 ntBASIC18.36■□□□□ 0.53
CCDC66A2RUB6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 KRT18P21-201ENST00000515767 1272 ntBASIC18.36■□□□□ 0.53
CCDC66A2RUB6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 VENTXP5-201ENST00000523979 775 ntBASIC18.36■□□□□ 0.53
CCDC66A2RUB6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 HYMAI.1-201ENST00000620949 238 ntBASIC18.36■□□□□ 0.53
CCDC66A2RUB6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 Z83836.1-201ENST00000624605 1642 ntBASIC18.35■□□□□ 0.53
CCDC66A2RUB6 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 KRT18P57-201ENST00000443599 1254 ntBASIC18.35■□□□□ 0.53
CCDC66A2RUB6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC66A2RUB6 LINC02012-201ENST00000608206 1725 ntBASIC18.35■□□□□ 0.53
CCDC66A2RUB6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.34■□□□□ 0.53
CCDC66A2RUB6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 RNF126P1-202ENST00000569893 925 ntBASIC18.34■□□□□ 0.53
CCDC66A2RUB6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC66A2RUB6 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms