Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 AC023141.13-201ENST00000604991 943 ntBASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 AC131009.4-201ENST00000624048 1740 ntBASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGC4Q9Y5F7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 KRT19P2-202ENST00000557173 1012 ntBASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 AC091167.2-201ENST00000579581 588 ntBASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 AC007064.4-201ENST00000637740 555 ntBASIC17.02■□□□□ 0.32
PCDHGC4Q9Y5F7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
PCDHGC4Q9Y5F7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGC4Q9Y5F7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.02■□□□□ 0.31
PCDHGC4Q9Y5F7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGC4Q9Y5F7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGC4Q9Y5F7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.02■□□□□ 0.31
PCDHGC4Q9Y5F7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGC4Q9Y5F7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 AL391256.1-201ENST00000443260 1855 ntBASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 MIR4515-201ENST00000584082 81 ntBASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 AC012569.1-201ENST00000591191 1524 ntBASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms