Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.59□□□□□ -0.07
MRPS28Q9Y2Q9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.59□□□□□ -0.07
MRPS28Q9Y2Q9 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MRPS28Q9Y2Q9 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MRPS28Q9Y2Q9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
MRPS28Q9Y2Q9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.59□□□□□ -0.07
MRPS28Q9Y2Q9 AC063926.3-201ENST00000624734 5658 ntBASIC14.59□□□□□ -0.07
MRPS28Q9Y2Q9 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MRPS28Q9Y2Q9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.59□□□□□ -0.07
MRPS28Q9Y2Q9 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MRPS28Q9Y2Q9 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MRPS28Q9Y2Q9 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
MRPS28Q9Y2Q9 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MRPS28Q9Y2Q9 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MRPS28Q9Y2Q9 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MRPS28Q9Y2Q9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MRPS28Q9Y2Q9 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
MRPS28Q9Y2Q9 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.59□□□□□ -0.07
MRPS28Q9Y2Q9 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.58□□□□□ -0.07
MRPS28Q9Y2Q9 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
MRPS28Q9Y2Q9 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
MRPS28Q9Y2Q9 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
MRPS28Q9Y2Q9 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
MRPS28Q9Y2Q9 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
MRPS28Q9Y2Q9 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
MRPS28Q9Y2Q9 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.58□□□□□ -0.07
MRPS28Q9Y2Q9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
MRPS28Q9Y2Q9 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
MRPS28Q9Y2Q9 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.58□□□□□ -0.07
MRPS28Q9Y2Q9 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
MRPS28Q9Y2Q9 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
MRPS28Q9Y2Q9 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
MRPS28Q9Y2Q9 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
MRPS28Q9Y2Q9 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 AL020989.1-201ENST00000422979 469 ntBASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 TMPOP1-202ENST00000424642 1267 ntBASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 AC096582.2-201ENST00000510860 516 ntBASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 KRT18P21-201ENST00000515767 1272 ntBASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 PMPCAP1-201ENST00000508114 1576 ntBASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MRPS28Q9Y2Q9 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 INTS4P1-201ENST00000438455 1935 ntBASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 AC148477.5-201ENST00000625164 1645 ntBASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPS28Q9Y2Q9 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms