Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.12■□□□□ 0.17
LRCH1Q9Y2L9 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 GRK6P1-201ENST00000400595 1711 ntBASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 BX276092.7-203ENST00000637198 1536 ntBASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 MMP23A-201ENST00000234610 1017 ntBASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 AC087499.1-201ENST00000418141 1075 ntBASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 AP002490.2-201ENST00000524791 560 ntBASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH1Q9Y2L9 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 TSPY15P-201ENST00000457163 923 ntBASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 B3GAT3P1-201ENST00000471720 806 ntBASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms