Protein–RNA interactions for Protein: Q9Y287

ITM2B, Integral membrane protein 2B, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2BQ9Y287 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
ITM2BQ9Y287 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ITM2BQ9Y287 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 AC092919.2-201ENST00000623631 1645 ntBASIC17.04■□□□□ 0.32
ITM2BQ9Y287 AC139713.2-201ENST00000641328 2723 ntBASIC17.04■□□□□ 0.32
ITM2BQ9Y287 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 RPS8P6-201ENST00000426177 609 ntBASIC17.04■□□□□ 0.32
ITM2BQ9Y287 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 AC007326.2-201ENST00000624224 7579 ntBASIC17.04■□□□□ 0.32
ITM2BQ9Y287 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ITM2BQ9Y287 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 REXO1L3P-201ENST00000622202 1288 ntBASIC17.03■□□□□ 0.32
ITM2BQ9Y287 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 AC007064.4-201ENST00000637740 555 ntBASIC17.03■□□□□ 0.32
ITM2BQ9Y287 AC134684.3-201ENST00000641758 218 ntBASIC17.03■□□□□ 0.32
ITM2BQ9Y287 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 AC046158.3-201ENST00000624947 2558 ntBASIC17.03■□□□□ 0.32
ITM2BQ9Y287 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.03■□□□□ 0.32
ITM2BQ9Y287 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.02■□□□□ 0.32
ITM2BQ9Y287 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ITM2BQ9Y287 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ITM2BQ9Y287 AC129492.6-201ENST00000611383 1305 ntBASIC17.02■□□□□ 0.32
ITM2BQ9Y287 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ITM2BQ9Y287 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
ITM2BQ9Y287 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ITM2BQ9Y287 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.02■□□□□ 0.32
ITM2BQ9Y287 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.02■□□□□ 0.32
ITM2BQ9Y287 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ITM2BQ9Y287 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.02■□□□□ 0.32
ITM2BQ9Y287 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.02■□□□□ 0.32
ITM2BQ9Y287 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ITM2BQ9Y287 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.02■□□□□ 0.32
ITM2BQ9Y287 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.02■□□□□ 0.32
ITM2BQ9Y287 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.02■□□□□ 0.32
ITM2BQ9Y287 MIR4469-201ENST00000583919 79 ntBASIC17.02■□□□□ 0.32
ITM2BQ9Y287 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ITM2BQ9Y287 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ITM2BQ9Y287 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.02■□□□□ 0.32
ITM2BQ9Y287 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ITM2BQ9Y287 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
ITM2BQ9Y287 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.02■□□□□ 0.31
ITM2BQ9Y287 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
ITM2BQ9Y287 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
ITM2BQ9Y287 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.02■□□□□ 0.31
ITM2BQ9Y287 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
ITM2BQ9Y287 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms