Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 AC004835.2-201ENST00000603762 682 ntBASIC17.49■□□□□ 0.39
SCML2Q9UQR0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 AC079140.1-201ENST00000508039 487 ntBASIC17.48■□□□□ 0.39
SCML2Q9UQR0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SCML2Q9UQR0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCML2Q9UQR0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCML2Q9UQR0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCML2Q9UQR0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCML2Q9UQR0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SCML2Q9UQR0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCML2Q9UQR0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCML2Q9UQR0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.47■□□□□ 0.39
SCML2Q9UQR0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCML2Q9UQR0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.47■□□□□ 0.39
SCML2Q9UQR0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.47■□□□□ 0.39
SCML2Q9UQR0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCML2Q9UQR0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.47■□□□□ 0.39
SCML2Q9UQR0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCML2Q9UQR0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SCML2Q9UQR0 AC016027.1-202ENST00000607927 1699 ntBASIC17.47■□□□□ 0.39
SCML2Q9UQR0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
SCML2Q9UQR0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCML2Q9UQR0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SCML2Q9UQR0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCML2Q9UQR0 AC105020.1-201ENST00000435356 2205 ntBASIC17.47■□□□□ 0.39
SCML2Q9UQR0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCML2Q9UQR0 AC005915.1-201ENST00000624912 2018 ntBASIC17.47■□□□□ 0.39
SCML2Q9UQR0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCML2Q9UQR0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCML2Q9UQR0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms