Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 TFAMP1-201ENST00000412727 736 ntBASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 SPDYE11-202ENST00000450699 704 ntBASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 RN7SL589P-201ENST00000481268 310 ntBASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 SPDYE9P-201ENST00000570642 692 ntBASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 AC021097.1-201ENST00000607902 574 ntBASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 SPDYE10P-202ENST00000612005 668 ntBASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 SPDYE8P-202ENST00000612377 668 ntBASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.05■□□□□ 0.48
UBQLN1Q9UMX0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 AC004461.1-201ENST00000412461 403 ntBASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 TIMM8BP1-201ENST00000452384 211 ntBASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 AC022145.2-201ENST00000598203 171 ntBASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 AC004835.2-201ENST00000603762 682 ntBASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 WASH6P-202ENST00000359512 1437 ntBASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN1Q9UMX0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN1Q9UMX0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms