Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.06■□□□□ 0.8
ZNRF3Q9ULT6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC20.06■□□□□ 0.8
ZNRF3Q9ULT6 WASH4P-201ENST00000564273 1246 ntBASIC20.06■□□□□ 0.8
ZNRF3Q9ULT6 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.06■□□□□ 0.8
ZNRF3Q9ULT6 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.06■□□□□ 0.8
ZNRF3Q9ULT6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNRF3Q9ULT6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNRF3Q9ULT6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNRF3Q9ULT6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.06■□□□□ 0.8
ZNRF3Q9ULT6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.06■□□□□ 0.8
ZNRF3Q9ULT6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNRF3Q9ULT6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNRF3Q9ULT6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNRF3Q9ULT6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
ZNRF3Q9ULT6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ZNRF3Q9ULT6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNRF3Q9ULT6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNRF3Q9ULT6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZNRF3Q9ULT6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNRF3Q9ULT6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNRF3Q9ULT6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 AL023806.1-201ENST00000603994 1649 ntBASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 CD81-207ENST00000481687 890 ntTSL 2 BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 AL512361.1-201ENST00000554200 418 ntBASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNRF3Q9ULT6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 AC116353.5-201ENST00000638148 1699 ntBASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 MIR658-201ENST00000385210 100 ntBASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 RAB43P1-201ENST00000561790 589 ntBASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNRF3Q9ULT6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNRF3Q9ULT6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNRF3Q9ULT6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNRF3Q9ULT6 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNRF3Q9ULT6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ZNRF3Q9ULT6 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNRF3Q9ULT6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC20.03■□□□□ 0.8
ZNRF3Q9ULT6 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC20.03■□□□□ 0.8
ZNRF3Q9ULT6 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNRF3Q9ULT6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNRF3Q9ULT6 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.03■□□□□ 0.8
ZNRF3Q9ULT6 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
ZNRF3Q9ULT6 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC20.03■□□□□ 0.8
ZNRF3Q9ULT6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.03■□□□□ 0.8
ZNRF3Q9ULT6 AC044860.1-202ENST00000559481 777 ntBASIC20.03■□□□□ 0.8
ZNRF3Q9ULT6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNRF3Q9ULT6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms