Protein–RNA interactions for Protein: Q9ULM6

CNOT6, CCR4-NOT transcription complex subunit 6, humanhuman

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6Q9ULM6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 MIR940-201ENST00000401276 94 ntBASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 AC007967.2-201ENST00000432613 625 ntBASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 HCG4B-203ENST00000450128 991 ntBASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 SLC25A6P2-201ENST00000497974 877 ntBASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 FAM197Y3-203ENST00000618346 717 ntBASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CNOT6Q9ULM6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 MRPL20P1-201ENST00000400819 433 ntBASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 IGLL3P-201ENST00000412472 434 ntBASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 AC087163.2-201ENST00000457299 853 ntBASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 PGAM5P1-201ENST00000518923 814 ntBASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 CICP6-201ENST00000457191 2729 ntBASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.94■□□□□ 0.3
CNOT6Q9ULM6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 CRYGEP-201ENST00000412192 528 ntBASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 MED15P5-201ENST00000423150 992 ntBASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 AL591424.1-201ENST00000442569 1213 ntBASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 KRT18P3-201ENST00000451602 1288 ntBASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 MIR4751-201ENST00000578027 74 ntBASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 AC064836.3-201ENST00000607928 673 ntBASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 AC010654.1-201ENST00000615722 808 ntBASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.93■□□□□ 0.3
CNOT6Q9ULM6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms