Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 AC003669.1-201ENST00000334569 611 ntBASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 YBX2P1-201ENST00000394192 760 ntBASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 SLC25A1P3-201ENST00000395415 828 ntBASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 RPSAP43-201ENST00000402237 625 ntBASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 AC108751.1-201ENST00000490852 363 ntBASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 AL353593.2-201ENST00000602529 1483 ntBASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 AC109462.3-201ENST00000573934 613 ntBASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 AC010327.4-202ENST00000591484 748 ntBASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 AC019129.2-201ENST00000609837 1235 ntBASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 NCF1C-201ENST00000438382 1427 ntBASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKIPSDQ9NZQ3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 AC005915.1-201ENST00000624912 2018 ntBASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 AC073621.1-201ENST00000392730 636 ntBASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 SIGLEC30P-201ENST00000455569 941 ntBASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 IGHV3-52-201ENST00000519770 353 ntBASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.11■□□□□ 0.33
NCKIPSDQ9NZQ3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms