Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.39■□□□□ 0.53
TRMT13Q9NUP7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRMT13Q9NUP7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRMT13Q9NUP7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRMT13Q9NUP7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRMT13Q9NUP7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.39■□□□□ 0.53
TRMT13Q9NUP7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TRMT13Q9NUP7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRMT13Q9NUP7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 AC009477.1-201ENST00000452936 217 ntBASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 AC009407.1-201ENST00000568958 598 ntBASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRMT13Q9NUP7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 HLA-H-201ENST00000383620 1096 ntBASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 AC008738.7-201ENST00000609744 511 ntBASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 AC116353.5-201ENST00000638148 1699 ntBASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.37■□□□□ 0.53
TRMT13Q9NUP7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.36■□□□□ 0.53
TRMT13Q9NUP7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms