Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.81■□□□□ 0.28
TREX1Q9NSU2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.81■□□□□ 0.28
TREX1Q9NSU2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
TREX1Q9NSU2 AL160237.2-201ENST00000556165 472 ntBASIC16.81■□□□□ 0.28
TREX1Q9NSU2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.81■□□□□ 0.28
TREX1Q9NSU2 AC005412.3-201ENST00000580309 715 ntBASIC16.81■□□□□ 0.28
TREX1Q9NSU2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.81■□□□□ 0.28
TREX1Q9NSU2 CYP2A7P1-201ENST00000595391 815 ntBASIC16.81■□□□□ 0.28
TREX1Q9NSU2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TREX1Q9NSU2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TREX1Q9NSU2 MIR7706-201ENST00000613747 67 ntBASIC16.81■□□□□ 0.28
TREX1Q9NSU2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.81■□□□□ 0.28
TREX1Q9NSU2 AC117500.6-201ENST00000624871 588 ntBASIC16.81■□□□□ 0.28
TREX1Q9NSU2 AC005593.1-201ENST00000624894 515 ntBASIC16.81■□□□□ 0.28
TREX1Q9NSU2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.81■□□□□ 0.28
TREX1Q9NSU2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TREX1Q9NSU2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.81■□□□□ 0.28
TREX1Q9NSU2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TREX1Q9NSU2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TREX1Q9NSU2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TREX1Q9NSU2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.81■□□□□ 0.28
TREX1Q9NSU2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TREX1Q9NSU2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 CYP2T1P-202ENST00000641596 2535 ntBASIC16.8■□□□□ 0.28
TREX1Q9NSU2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 GGT4P-201ENST00000623672 1708 ntBASIC16.8■□□□□ 0.28
TREX1Q9NSU2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 AC108073.2-201ENST00000464002 357 ntBASIC16.8■□□□□ 0.28
TREX1Q9NSU2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 KRT126P-201ENST00000549467 1181 ntBASIC16.8■□□□□ 0.28
TREX1Q9NSU2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 AL049840.3-201ENST00000602669 611 ntBASIC16.8■□□□□ 0.28
TREX1Q9NSU2 AL773604.1-201ENST00000617417 272 ntBASIC16.8■□□□□ 0.28
TREX1Q9NSU2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 AL031731.1-201ENST00000642131 2094 ntBASIC16.8■□□□□ 0.28
TREX1Q9NSU2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TREX1Q9NSU2 DOC2GP-204ENST00000639052 2548 ntBASIC16.79■□□□□ 0.28
TREX1Q9NSU2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.79■□□□□ 0.28
TREX1Q9NSU2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.79■□□□□ 0.28
TREX1Q9NSU2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TREX1Q9NSU2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TREX1Q9NSU2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TREX1Q9NSU2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TREX1Q9NSU2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.79■□□□□ 0.28
TREX1Q9NSU2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TREX1Q9NSU2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TREX1Q9NSU2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TREX1Q9NSU2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TREX1Q9NSU2 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TREX1Q9NSU2 MRPL20P1-201ENST00000400819 433 ntBASIC16.79■□□□□ 0.28
TREX1Q9NSU2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
TREX1Q9NSU2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TREX1Q9NSU2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.79■□□□□ 0.28
TREX1Q9NSU2 RNA5SP419-201ENST00000515908 135 ntBASIC16.79■□□□□ 0.28
TREX1Q9NSU2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TREX1Q9NSU2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TREX1Q9NSU2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TREX1Q9NSU2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms