Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.14■□□□□ 0.34
SPHK2Q9NRA0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SPHK2Q9NRA0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 FAM8A3P-201ENST00000427218 844 ntBASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 KRT18P34-201ENST00000488218 1270 ntBASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 DUX4L27-201ENST00000554796 1261 ntBASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 AL138918.1-201ENST00000568306 659 ntBASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 AC051619.7-201ENST00000568314 623 ntBASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 AC013467.2-201ENST00000605472 835 ntBASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.14■□□□□ 0.33
SPHK2Q9NRA0 OR6D1P-202ENST00000641007 5290 ntBASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 SPDYE7P-202ENST00000420373 878 ntBASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 ALG1L8P-201ENST00000533887 760 ntBASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 AL096865.1-201ENST00000606796 927 ntBASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 AL023806.1-201ENST00000603994 1649 ntBASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK2Q9NRA0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms