Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 ARMC10P1-201ENST00000313754 855 ntBASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 AC003669.1-201ENST00000334569 611 ntBASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 RN7SL606P-201ENST00000472779 293 ntBASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 FAM86EP-206ENST00000510506 987 ntBASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 AC009533.2-201ENST00000543664 586 ntBASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 IER3-202ENST00000376377 1350 ntBASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 GPR89P-201ENST00000407924 1495 ntBASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN4Q9NQP4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN4Q9NQP4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
PFDN4Q9NQP4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.71■□□□□ 0.26
PFDN4Q9NQP4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
PFDN4Q9NQP4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PFDN4Q9NQP4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.26
PFDN4Q9NQP4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PFDN4Q9NQP4 TUBB8P12-201ENST00000308911 1335 ntBASIC16.7■□□□□ 0.26
PFDN4Q9NQP4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN4Q9NQP4 TUBB7P-202ENST00000428444 1305 ntBASIC16.7■□□□□ 0.26
PFDN4Q9NQP4 TUBB8P7-204ENST00000567960 1332 ntBASIC16.7■□□□□ 0.26
PFDN4Q9NQP4 KRT8P10-201ENST00000450021 1447 ntBASIC16.7■□□□□ 0.26
PFDN4Q9NQP4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN4Q9NQP4 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.7■□□□□ 0.26
PFDN4Q9NQP4 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN4Q9NQP4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PFDN4Q9NQP4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN4Q9NQP4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PFDN4Q9NQP4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms