Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMG20AQ9NP66 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 AC006538.1-201ENST00000567905 1585 ntBASIC15.42■□□□□ 0.06
HMG20AQ9NP66 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 LINC01311-201ENST00000565162 1445 ntBASIC15.42■□□□□ 0.06
HMG20AQ9NP66 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMG20AQ9NP66 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 AC132938.6-201ENST00000623828 1655 ntBASIC15.41■□□□□ 0.06
HMG20AQ9NP66 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 DDX43P3-201ENST00000441064 443 ntBASIC15.41■□□□□ 0.06
HMG20AQ9NP66 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 SEC1P-202ENST00000473944 940 ntBASIC15.41■□□□□ 0.06
HMG20AQ9NP66 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 NEK4P2-201ENST00000580004 1012 ntBASIC15.41■□□□□ 0.06
HMG20AQ9NP66 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 AL024508.2-201ENST00000607749 1894 ntBASIC15.41■□□□□ 0.06
HMG20AQ9NP66 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 AC073347.1-201ENST00000421633 2643 ntBASIC15.41■□□□□ 0.06
HMG20AQ9NP66 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 AP002414.2-201ENST00000591780 3365 ntBASIC15.41■□□□□ 0.06
HMG20AQ9NP66 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMG20AQ9NP66 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HMG20AQ9NP66 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMG20AQ9NP66 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMG20AQ9NP66 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMG20AQ9NP66 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.4■□□□□ 0.06
HMG20AQ9NP66 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.4■□□□□ 0.06
HMG20AQ9NP66 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.4■□□□□ 0.06
HMG20AQ9NP66 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMG20AQ9NP66 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMG20AQ9NP66 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMG20AQ9NP66 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMG20AQ9NP66 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMG20AQ9NP66 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.4■□□□□ 0.06
HMG20AQ9NP66 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms