Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.83■□□□□ 0.44
CD248Q9HCU0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CD248Q9HCU0 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CD248Q9HCU0 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CD248Q9HCU0 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CD248Q9HCU0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.83■□□□□ 0.44
CD248Q9HCU0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.82■□□□□ 0.44
CD248Q9HCU0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CD248Q9HCU0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CD248Q9HCU0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD248Q9HCU0 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD248Q9HCU0 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD248Q9HCU0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.82■□□□□ 0.44
CD248Q9HCU0 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD248Q9HCU0 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CD248Q9HCU0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.82■□□□□ 0.44
CD248Q9HCU0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.82■□□□□ 0.44
CD248Q9HCU0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.82■□□□□ 0.44
CD248Q9HCU0 YBX2P1-201ENST00000394192 760 ntBASIC17.82■□□□□ 0.44
CD248Q9HCU0 UPF3AP3-201ENST00000420996 769 ntBASIC17.82■□□□□ 0.44
CD248Q9HCU0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.82■□□□□ 0.44
CD248Q9HCU0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.82■□□□□ 0.44
CD248Q9HCU0 GPX1P2-201ENST00000429271 606 ntBASIC17.82■□□□□ 0.44
CD248Q9HCU0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.82■□□□□ 0.44
CD248Q9HCU0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.82■□□□□ 0.44
CD248Q9HCU0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.82■□□□□ 0.44
CD248Q9HCU0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.82■□□□□ 0.44
CD248Q9HCU0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
CD248Q9HCU0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.82■□□□□ 0.44
CD248Q9HCU0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.82■□□□□ 0.44
CD248Q9HCU0 AC073592.5-201ENST00000624854 528 ntBASIC17.82■□□□□ 0.44
CD248Q9HCU0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD248Q9HCU0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD248Q9HCU0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.82■□□□□ 0.44
CD248Q9HCU0 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD248Q9HCU0 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CD248Q9HCU0 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD248Q9HCU0 AC006116.8-202ENST00000587620 1550 ntBASIC17.82■□□□□ 0.44
CD248Q9HCU0 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD248Q9HCU0 TSPY26P-202ENST00000565928 3884 ntBASIC17.82■□□□□ 0.44
CD248Q9HCU0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.82■□□□□ 0.44
CD248Q9HCU0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.82■□□□□ 0.44
CD248Q9HCU0 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CD248Q9HCU0 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.82■□□□□ 0.44
CD248Q9HCU0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.82■□□□□ 0.44
CD248Q9HCU0 AC132938.5-201ENST00000624980 1813 ntBASIC17.82■□□□□ 0.44
CD248Q9HCU0 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD248Q9HCU0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD248Q9HCU0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.81■□□□□ 0.44
CD248Q9HCU0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.81■□□□□ 0.44
CD248Q9HCU0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.81■□□□□ 0.44
CD248Q9HCU0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.81■□□□□ 0.44
CD248Q9HCU0 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD248Q9HCU0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD248Q9HCU0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CD248Q9HCU0 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD248Q9HCU0 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD248Q9HCU0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD248Q9HCU0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD248Q9HCU0 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CD248Q9HCU0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD248Q9HCU0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD248Q9HCU0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD248Q9HCU0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD248Q9HCU0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD248Q9HCU0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD248Q9HCU0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.81■□□□□ 0.44
CD248Q9HCU0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.81■□□□□ 0.44
CD248Q9HCU0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.81■□□□□ 0.44
CD248Q9HCU0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.81■□□□□ 0.44
CD248Q9HCU0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.81■□□□□ 0.44
CD248Q9HCU0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD248Q9HCU0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.81■□□□□ 0.44
CD248Q9HCU0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.81■□□□□ 0.44
CD248Q9HCU0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CD248Q9HCU0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.81■□□□□ 0.44
CD248Q9HCU0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.81■□□□□ 0.44
CD248Q9HCU0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD248Q9HCU0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CD248Q9HCU0 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD248Q9HCU0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD248Q9HCU0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD248Q9HCU0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD248Q9HCU0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.81■□□□□ 0.44
CD248Q9HCU0 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD248Q9HCU0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD248Q9HCU0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.8■□□□□ 0.44
CD248Q9HCU0 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.8■□□□□ 0.44
CD248Q9HCU0 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD248Q9HCU0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.8■□□□□ 0.44
CD248Q9HCU0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.8■□□□□ 0.44
CD248Q9HCU0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD248Q9HCU0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.8■□□□□ 0.44
CD248Q9HCU0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.8■□□□□ 0.44
CD248Q9HCU0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.8■□□□□ 0.44
CD248Q9HCU0 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD248Q9HCU0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.8■□□□□ 0.44
CD248Q9HCU0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD248Q9HCU0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD248Q9HCU0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms