Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 AL671710.1-201ENST00000610245 2349 ntBASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 AC011676.5-201ENST00000624864 2660 ntBASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 AC069335.1-201ENST00000489972 472 ntBASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 AC026120.1-201ENST00000611536 926 ntBASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 AL139011.1-202ENST00000642063 584 ntBASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 UBALD1-205ENST00000590891 2641 ntBASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 AL031731.1-201ENST00000642131 2094 ntBASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 AL592309.1-201ENST00000443127 649 ntBASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 HLA-J-202ENST00000469281 1241 ntBASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 AP001059.3-201ENST00000619053 235 ntBASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.94□□□□□ -0.02
KIAA1549Q9HCM3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 PCDHA12-202ENST00000613593 2588 ntBASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 AC002056.1-201ENST00000395613 760 ntBASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 AC079140.1-201ENST00000508039 487 ntBASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 AC004449.1-201ENST00000564240 433 ntBASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
KIAA1549Q9HCM3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms