Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 HLA-J-202ENST00000469281 1241 ntBASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 AC106795.1-205ENST00000512851 1056 ntBASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRTM1Q9HBL6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
LRTM1Q9HBL6 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.27■□□□□ 0.19
LRTM1Q9HBL6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRTM1Q9HBL6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRTM1Q9HBL6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRTM1Q9HBL6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
LRTM1Q9HBL6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LRTM1Q9HBL6 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRTM1Q9HBL6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRTM1Q9HBL6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
LRTM1Q9HBL6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.27■□□□□ 0.19
LRTM1Q9HBL6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRTM1Q9HBL6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
LRTM1Q9HBL6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.27■□□□□ 0.19
LRTM1Q9HBL6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 CYP2T1P-202ENST00000641596 2535 ntBASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 FOSL1P1-201ENST00000511041 816 ntBASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 NKAPP1-205ENST00000585790 367 ntBASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 AC064862.7-201ENST00000604520 867 ntBASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 AC006538.1-201ENST00000567905 1585 ntBASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LRTM1Q9HBL6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 RBM17P3-201ENST00000417687 1192 ntBASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 AL732292.2-201ENST00000609649 430 ntBASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 AL139288.1-201ENST00000623748 933 ntBASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 ALOX12P2-203ENST00000570921 1945 ntBASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms