Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 TSPY18P-201ENST00000441642 509 ntBASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 NKAPP1-205ENST00000585790 367 ntBASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 AC008608.2-201ENST00000606089 416 ntBASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 SCARNA2-201ENST00000458748 420 ntBASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 AP002490.2-201ENST00000524791 560 ntBASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC68Q9H2F9 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 AL355877.3-201ENST00000622820 899 ntBASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC68Q9H2F9 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms