Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF407Q9C0G0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 MIR770-201ENST00000390219 98 ntBASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 GPS2P2-201ENST00000430745 888 ntBASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 AP000842.3-202ENST00000569238 1080 ntBASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 UXT-AS1-201ENST00000590504 1525 ntBASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 AL355306.1-201ENST00000415580 579 ntBASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 FAM86C2P-203ENST00000528684 1004 ntBASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF407Q9C0G0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 AC051619.7-201ENST00000568314 623 ntBASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 AL671277.1-201ENST00000429656 993 ntBASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 AC067863.1-201ENST00000494933 530 ntBASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 LINC01225-203ENST00000563550 1244 ntBASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF407Q9C0G0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF407Q9C0G0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF407Q9C0G0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.1■□□□□ 0.01
ZNF407Q9C0G0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF407Q9C0G0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF407Q9C0G0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF407Q9C0G0 AL671710.1-201ENST00000610245 2349 ntBASIC15.1■□□□□ 0.01
ZNF407Q9C0G0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF407Q9C0G0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF407Q9C0G0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF407Q9C0G0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF407Q9C0G0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
ZNF407Q9C0G0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF407Q9C0G0 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms