Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.56■□□□□ 0.56
UBE2OQ9C0C9 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.56■□□□□ 0.56
UBE2OQ9C0C9 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.56■□□□□ 0.56
UBE2OQ9C0C9 AC132938.2-201ENST00000579188 680 ntBASIC18.56■□□□□ 0.56
UBE2OQ9C0C9 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
UBE2OQ9C0C9 AC027307.2-201ENST00000591252 911 ntBASIC18.56■□□□□ 0.56
UBE2OQ9C0C9 AL591163.1-201ENST00000641757 987 ntBASIC18.56■□□□□ 0.56
UBE2OQ9C0C9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
UBE2OQ9C0C9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2OQ9C0C9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
UBE2OQ9C0C9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2OQ9C0C9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.56■□□□□ 0.56
UBE2OQ9C0C9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2OQ9C0C9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2OQ9C0C9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2OQ9C0C9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2OQ9C0C9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 FLJ13224-201ENST00000313737 1514 ntBASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 DGCR5-201ENST00000399539 862 ntBASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 AC011495.1-201ENST00000498085 584 ntBASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 AC107918.2-201ENST00000530817 355 ntBASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 AL138828.2-201ENST00000615812 383 ntBASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
UBE2OQ9C0C9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 WASH6P-202ENST00000359512 1437 ntBASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms