Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 MIR4722-201ENST00000578292 60 ntBASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 AL118558.3-201ENST00000607414 1079 ntBASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTNAP3Q9BZ76 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 STK19B-204ENST00000512515 211 ntBASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTNAP3Q9BZ76 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 AC087499.5-201ENST00000452760 1342 ntBASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 SPDYE19P-201ENST00000338590 713 ntBASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 AC005229.1-201ENST00000392885 409 ntBASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 FP475955.4-201ENST00000623131 1990 ntBASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNTNAP3Q9BZ76 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms