Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AP002490.2-201ENST00000524791 560 ntBASIC17.64■□□□□ 0.41
SMOQ99835 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.64■□□□□ 0.41
SMOQ99835 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.64■□□□□ 0.41
SMOQ99835 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.64■□□□□ 0.41
SMOQ99835 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMOQ99835 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.64■□□□□ 0.41
SMOQ99835 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMOQ99835 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMOQ99835 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.64■□□□□ 0.41
SMOQ99835 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.64■□□□□ 0.41
SMOQ99835 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMOQ99835 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMOQ99835 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMOQ99835 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SMOQ99835 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.64■□□□□ 0.41
SMOQ99835 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SMOQ99835 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMOQ99835 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.64■□□□□ 0.41
SMOQ99835 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.64■□□□□ 0.41
SMOQ99835 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SMOQ99835 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMOQ99835 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMOQ99835 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SMOQ99835 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
SMOQ99835 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SMOQ99835 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMOQ99835 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMOQ99835 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMOQ99835 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMOQ99835 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SMOQ99835 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SMOQ99835 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMOQ99835 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMOQ99835 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMOQ99835 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
SMOQ99835 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMOQ99835 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMOQ99835 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMOQ99835 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.63■□□□□ 0.41
SMOQ99835 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.63■□□□□ 0.41
SMOQ99835 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMOQ99835 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.63■□□□□ 0.41
SMOQ99835 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.63■□□□□ 0.41
SMOQ99835 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SMOQ99835 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SMOQ99835 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.63■□□□□ 0.41
SMOQ99835 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.63■□□□□ 0.41
SMOQ99835 AP001160.2-201ENST00000596071 487 ntBASIC17.63■□□□□ 0.41
SMOQ99835 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMOQ99835 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.63■□□□□ 0.41
SMOQ99835 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SMOQ99835 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.63■□□□□ 0.41
SMOQ99835 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMOQ99835 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.63■□□□□ 0.41
SMOQ99835 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMOQ99835 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.63■□□□□ 0.41
SMOQ99835 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMOQ99835 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.63■□□□□ 0.41
SMOQ99835 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMOQ99835 AL603756.1-201ENST00000606511 2163 ntBASIC17.63■□□□□ 0.41
SMOQ99835 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.63■□□□□ 0.41
SMOQ99835 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMOQ99835 KRT8P39-201ENST00000396270 1433 ntBASIC17.63■□□□□ 0.41
SMOQ99835 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMOQ99835 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMOQ99835 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMOQ99835 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SMOQ99835 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SMOQ99835 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.62■□□□□ 0.41
SMOQ99835 AC078925.2-201ENST00000624013 1973 ntBASIC17.62■□□□□ 0.41
SMOQ99835 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SMOQ99835 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SMOQ99835 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.62■□□□□ 0.41
SMOQ99835 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
SMOQ99835 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.62■□□□□ 0.41
SMOQ99835 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.62■□□□□ 0.41
SMOQ99835 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.62■□□□□ 0.41
SMOQ99835 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SMOQ99835 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.62■□□□□ 0.41
SMOQ99835 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.62■□□□□ 0.41
SMOQ99835 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.62■□□□□ 0.41
SMOQ99835 AL596442.2-201ENST00000610240 980 ntBASIC17.62■□□□□ 0.41
SMOQ99835 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms