Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.42■□□□□ 0.06
NPAS1Q99742 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.42■□□□□ 0.06
NPAS1Q99742 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.42■□□□□ 0.06
NPAS1Q99742 AC124947.2-201ENST00000547118 1133 ntBASIC15.42■□□□□ 0.06
NPAS1Q99742 AC106730.1-201ENST00000566722 1090 ntBASIC15.42■□□□□ 0.06
NPAS1Q99742 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.42■□□□□ 0.06
NPAS1Q99742 PGM5P2-202ENST00000637225 1043 ntBASIC15.42■□□□□ 0.06
NPAS1Q99742 PCDH8P1-201ENST00000428983 2773 ntBASIC15.42■□□□□ 0.06
NPAS1Q99742 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS1Q99742 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
NPAS1Q99742 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS1Q99742 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS1Q99742 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS1Q99742 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NPAS1Q99742 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
NPAS1Q99742 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.42■□□□□ 0.06
NPAS1Q99742 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS1Q99742 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS1Q99742 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NPAS1Q99742 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS1Q99742 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.41■□□□□ 0.06
NPAS1Q99742 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS1Q99742 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS1Q99742 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.41■□□□□ 0.06
NPAS1Q99742 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS1Q99742 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.41■□□□□ 0.06
NPAS1Q99742 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS1Q99742 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS1Q99742 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS1Q99742 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.41■□□□□ 0.06
NPAS1Q99742 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS1Q99742 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NPAS1Q99742 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS1Q99742 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.41■□□□□ 0.06
NPAS1Q99742 AC007967.2-201ENST00000432613 625 ntBASIC15.41■□□□□ 0.06
NPAS1Q99742 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.41■□□□□ 0.06
NPAS1Q99742 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.41■□□□□ 0.06
NPAS1Q99742 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.41■□□□□ 0.06
NPAS1Q99742 AC107918.2-201ENST00000530817 355 ntBASIC15.41■□□□□ 0.06
NPAS1Q99742 MIR4751-201ENST00000578027 74 ntBASIC15.41■□□□□ 0.06
NPAS1Q99742 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.41■□□□□ 0.06
NPAS1Q99742 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NPAS1Q99742 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS1Q99742 REXO1L3P-201ENST00000622202 1288 ntBASIC15.41■□□□□ 0.06
NPAS1Q99742 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS1Q99742 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NPAS1Q99742 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NPAS1Q99742 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS1Q99742 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NPAS1Q99742 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS1Q99742 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS1Q99742 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NPAS1Q99742 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NPAS1Q99742 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NPAS1Q99742 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS1Q99742 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS1Q99742 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NPAS1Q99742 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.4■□□□□ 0.06
NPAS1Q99742 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.4■□□□□ 0.06
NPAS1Q99742 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.4■□□□□ 0.06
NPAS1Q99742 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS1Q99742 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS1Q99742 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.4■□□□□ 0.06
NPAS1Q99742 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.4■□□□□ 0.06
NPAS1Q99742 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS1Q99742 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS1Q99742 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.4■□□□□ 0.06
NPAS1Q99742 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS1Q99742 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS1Q99742 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS1Q99742 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS1Q99742 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS1Q99742 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.4■□□□□ 0.06
NPAS1Q99742 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.4■□□□□ 0.06
NPAS1Q99742 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
NPAS1Q99742 KRT18P2-201ENST00000447938 1258 ntBASIC15.4■□□□□ 0.06
NPAS1Q99742 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.4■□□□□ 0.06
NPAS1Q99742 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.4■□□□□ 0.06
NPAS1Q99742 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.4■□□□□ 0.06
NPAS1Q99742 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS1Q99742 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.4■□□□□ 0.06
NPAS1Q99742 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS1Q99742 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS1Q99742 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS1Q99742 NKILA-202ENST00000614771 2598 ntBASIC15.4■□□□□ 0.06
NPAS1Q99742 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS1Q99742 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
NPAS1Q99742 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
NPAS1Q99742 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS1Q99742 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS1Q99742 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.4■□□□□ 0.06
NPAS1Q99742 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS1Q99742 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NPAS1Q99742 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS1Q99742 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS1Q99742 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NPAS1Q99742 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.4■□□□□ 0.06
NPAS1Q99742 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.4■□□□□ 0.06
NPAS1Q99742 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.4■□□□□ 0.06
NPAS1Q99742 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms