Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AC112191.1-201ENST00000523689 701 ntBASIC13.75□□□□□ -0.21
ZNF48Q96MX3 AC107918.2-201ENST00000530817 355 ntBASIC13.75□□□□□ -0.21
ZNF48Q96MX3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 LYSMD4-203ENST00000378904 2122 ntBASIC13.75□□□□□ -0.21
ZNF48Q96MX3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF48Q96MX3 AC046158.3-201ENST00000624947 2558 ntBASIC13.75□□□□□ -0.21
ZNF48Q96MX3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 AC004449.1-201ENST00000564240 433 ntBASIC13.74□□□□□ -0.21
ZNF48Q96MX3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF48Q96MX3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 TIMM8BP1-201ENST00000452384 211 ntBASIC13.73□□□□□ -0.21
ZNF48Q96MX3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 AC023141.5-201ENST00000458585 616 ntBASIC13.73□□□□□ -0.21
ZNF48Q96MX3 HLA-J-203ENST00000494367 1087 ntBASIC13.73□□□□□ -0.21
ZNF48Q96MX3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 AC109322.1-201ENST00000524499 1264 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms