Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.16■□□□□ 0.5
SNX27Q96L92 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SNX27Q96L92 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNX27Q96L92 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.16■□□□□ 0.5
SNX27Q96L92 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SNX27Q96L92 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX27Q96L92 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.16■□□□□ 0.5
SNX27Q96L92 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX27Q96L92 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SNX27Q96L92 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX27Q96L92 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX27Q96L92 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SNX27Q96L92 PCDHB17P-201ENST00000539533 2393 ntBASIC18.16■□□□□ 0.5
SNX27Q96L92 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX27Q96L92 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SNX27Q96L92 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX27Q96L92 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX27Q96L92 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX27Q96L92 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX27Q96L92 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX27Q96L92 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX27Q96L92 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX27Q96L92 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX27Q96L92 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
SNX27Q96L92 AC004461.1-201ENST00000412461 403 ntBASIC18.15■□□□□ 0.5
SNX27Q96L92 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX27Q96L92 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX27Q96L92 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX27Q96L92 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX27Q96L92 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.15■□□□□ 0.5
SNX27Q96L92 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.15■□□□□ 0.5
SNX27Q96L92 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.15■□□□□ 0.5
SNX27Q96L92 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SNX27Q96L92 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SNX27Q96L92 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX27Q96L92 AC027612.4-201ENST00000605371 583 ntBASIC18.15■□□□□ 0.5
SNX27Q96L92 AC013467.2-201ENST00000605472 835 ntBASIC18.15■□□□□ 0.5
SNX27Q96L92 AC026120.1-201ENST00000611536 926 ntBASIC18.15■□□□□ 0.5
SNX27Q96L92 AL161645.1-201ENST00000622716 1255 ntBASIC18.15■□□□□ 0.5
SNX27Q96L92 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX27Q96L92 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX27Q96L92 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX27Q96L92 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX27Q96L92 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX27Q96L92 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX27Q96L92 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX27Q96L92 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX27Q96L92 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX27Q96L92 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX27Q96L92 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX27Q96L92 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SNX27Q96L92 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SNX27Q96L92 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX27Q96L92 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SNX27Q96L92 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.14■□□□□ 0.5
SNX27Q96L92 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.14■□□□□ 0.5
SNX27Q96L92 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.5
SNX27Q96L92 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.14■□□□□ 0.5
SNX27Q96L92 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SNX27Q96L92 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SNX27Q96L92 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX27Q96L92 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX27Q96L92 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SNX27Q96L92 AC006277.1-201ENST00000624348 1610 ntBASIC18.14■□□□□ 0.49
SNX27Q96L92 LINC00895-201ENST00000629028 1637 ntBASIC18.14■□□□□ 0.49
SNX27Q96L92 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX27Q96L92 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX27Q96L92 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX27Q96L92 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.14■□□□□ 0.49
SNX27Q96L92 PMS2P4-201ENST00000412466 1052 ntBASIC18.14■□□□□ 0.49
SNX27Q96L92 TIMM8BP1-201ENST00000452384 211 ntBASIC18.14■□□□□ 0.49
SNX27Q96L92 KRT8P48-201ENST00000515599 1220 ntBASIC18.14■□□□□ 0.49
SNX27Q96L92 FAM86C2P-203ENST00000528684 1004 ntBASIC18.14■□□□□ 0.49
SNX27Q96L92 AL135744.1-201ENST00000565098 629 ntBASIC18.14■□□□□ 0.49
SNX27Q96L92 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.14■□□□□ 0.49
SNX27Q96L92 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX27Q96L92 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
SNX27Q96L92 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.14■□□□□ 0.49
SNX27Q96L92 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX27Q96L92 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX27Q96L92 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX27Q96L92 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNX27Q96L92 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNX27Q96L92 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.14■□□□□ 0.49
SNX27Q96L92 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.14■□□□□ 0.49
SNX27Q96L92 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.14■□□□□ 0.49
SNX27Q96L92 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNX27Q96L92 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX27Q96L92 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX27Q96L92 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNX27Q96L92 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.14■□□□□ 0.49
SNX27Q96L92 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX27Q96L92 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX27Q96L92 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX27Q96L92 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.13■□□□□ 0.49
SNX27Q96L92 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX27Q96L92 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.13■□□□□ 0.49
SNX27Q96L92 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SNX27Q96L92 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.13■□□□□ 0.49
SNX27Q96L92 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms