Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.78■□□□□ 0.44
SUSD3Q96L08 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SUSD3Q96L08 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SUSD3Q96L08 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SUSD3Q96L08 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SUSD3Q96L08 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SUSD3Q96L08 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
SUSD3Q96L08 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SUSD3Q96L08 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SUSD3Q96L08 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SUSD3Q96L08 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.78■□□□□ 0.44
SUSD3Q96L08 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.78■□□□□ 0.44
SUSD3Q96L08 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.78■□□□□ 0.44
SUSD3Q96L08 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SUSD3Q96L08 AC067863.1-201ENST00000494933 530 ntBASIC17.78■□□□□ 0.44
SUSD3Q96L08 AC069262.1-201ENST00000539058 672 ntBASIC17.78■□□□□ 0.44
SUSD3Q96L08 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.78■□□□□ 0.44
SUSD3Q96L08 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.78■□□□□ 0.44
SUSD3Q96L08 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.78■□□□□ 0.44
SUSD3Q96L08 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.78■□□□□ 0.44
SUSD3Q96L08 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.78■□□□□ 0.44
SUSD3Q96L08 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SUSD3Q96L08 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SUSD3Q96L08 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.78■□□□□ 0.44
SUSD3Q96L08 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SUSD3Q96L08 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SUSD3Q96L08 KRT8P39-201ENST00000396270 1433 ntBASIC17.78■□□□□ 0.44
SUSD3Q96L08 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.78■□□□□ 0.44
SUSD3Q96L08 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SUSD3Q96L08 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.78■□□□□ 0.44
SUSD3Q96L08 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SUSD3Q96L08 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SUSD3Q96L08 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SUSD3Q96L08 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SUSD3Q96L08 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SUSD3Q96L08 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.77■□□□□ 0.44
SUSD3Q96L08 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.77■□□□□ 0.44
SUSD3Q96L08 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.77■□□□□ 0.44
SUSD3Q96L08 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SUSD3Q96L08 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SUSD3Q96L08 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SUSD3Q96L08 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.77■□□□□ 0.44
SUSD3Q96L08 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.77■□□□□ 0.44
SUSD3Q96L08 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SUSD3Q96L08 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.77■□□□□ 0.44
SUSD3Q96L08 AL645608.8-201ENST00000606034 2086 ntBASIC17.77■□□□□ 0.44
SUSD3Q96L08 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SUSD3Q96L08 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SUSD3Q96L08 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.77■□□□□ 0.44
SUSD3Q96L08 MIR770-201ENST00000390219 98 ntBASIC17.77■□□□□ 0.44
SUSD3Q96L08 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
SUSD3Q96L08 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.77■□□□□ 0.44
SUSD3Q96L08 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SUSD3Q96L08 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.77■□□□□ 0.44
SUSD3Q96L08 SPDYE14P-201ENST00000442619 822 ntBASIC17.77■□□□□ 0.44
SUSD3Q96L08 CNN2P2-201ENST00000443536 909 ntBASIC17.77■□□□□ 0.44
SUSD3Q96L08 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.77■□□□□ 0.44
SUSD3Q96L08 CNN2P3-201ENST00000450201 906 ntBASIC17.77■□□□□ 0.44
SUSD3Q96L08 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.77■□□□□ 0.44
SUSD3Q96L08 AP002490.2-201ENST00000524791 560 ntBASIC17.77■□□□□ 0.44
SUSD3Q96L08 AC026150.2-201ENST00000564693 1156 ntBASIC17.77■□□□□ 0.44
SUSD3Q96L08 AL136317.3-201ENST00000618497 906 ntBASIC17.77■□□□□ 0.44
SUSD3Q96L08 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
SUSD3Q96L08 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SUSD3Q96L08 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SUSD3Q96L08 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SUSD3Q96L08 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SUSD3Q96L08 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SUSD3Q96L08 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SUSD3Q96L08 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.77■□□□□ 0.43
SUSD3Q96L08 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SUSD3Q96L08 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SUSD3Q96L08 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SUSD3Q96L08 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SUSD3Q96L08 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.76■□□□□ 0.43
SUSD3Q96L08 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SUSD3Q96L08 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SUSD3Q96L08 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SUSD3Q96L08 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SUSD3Q96L08 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SUSD3Q96L08 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.76■□□□□ 0.43
SUSD3Q96L08 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SUSD3Q96L08 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SUSD3Q96L08 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SUSD3Q96L08 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.76■□□□□ 0.43
SUSD3Q96L08 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SUSD3Q96L08 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.76■□□□□ 0.43
SUSD3Q96L08 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.76■□□□□ 0.43
SUSD3Q96L08 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.76■□□□□ 0.43
SUSD3Q96L08 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.76■□□□□ 0.43
SUSD3Q96L08 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.76■□□□□ 0.43
SUSD3Q96L08 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SUSD3Q96L08 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.76■□□□□ 0.43
SUSD3Q96L08 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SUSD3Q96L08 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SUSD3Q96L08 AC073389.1-201ENST00000595595 795 ntBASIC17.76■□□□□ 0.43
SUSD3Q96L08 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.76■□□□□ 0.43
SUSD3Q96L08 AL139011.1-202ENST00000642063 584 ntBASIC17.76■□□□□ 0.43
SUSD3Q96L08 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SUSD3Q96L08 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms