Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
PGBD1Q96JS3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PGBD1Q96JS3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.63■□□□□ 0.73
PGBD1Q96JS3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.63■□□□□ 0.73
PGBD1Q96JS3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 LINC02199-201ENST00000506655 2702 ntBASIC19.62■□□□□ 0.73
PGBD1Q96JS3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 MIR574-201ENST00000385209 96 ntBASIC19.62■□□□□ 0.73
PGBD1Q96JS3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 POLD2P1-201ENST00000511220 997 ntBASIC19.62■□□□□ 0.73
PGBD1Q96JS3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 IGHV3-65-201ENST00000523210 341 ntBASIC19.62■□□□□ 0.73
PGBD1Q96JS3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 AC008667.4-201ENST00000607370 168 ntBASIC19.62■□□□□ 0.73
PGBD1Q96JS3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.62■□□□□ 0.73
PGBD1Q96JS3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
PGBD1Q96JS3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PGBD1Q96JS3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 MIR4751-201ENST00000578027 74 ntBASIC19.6■□□□□ 0.73
PGBD1Q96JS3 AC140113.2-201ENST00000604370 208 ntBASIC19.6■□□□□ 0.73
PGBD1Q96JS3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms