Protein–RNA interactions for Protein: Q92772

CDKL2, Cyclin-dependent kinase-like 2, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2Q92772 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKL2Q92772 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CDKL2Q92772 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.1■□□□□ 0.33
CDKL2Q92772 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKL2Q92772 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKL2Q92772 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.1■□□□□ 0.33
CDKL2Q92772 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
CDKL2Q92772 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKL2Q92772 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CDKL2Q92772 AC063926.3-201ENST00000624734 5658 ntBASIC17.09■□□□□ 0.33
CDKL2Q92772 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CDKL2Q92772 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL2Q92772 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL2Q92772 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
CDKL2Q92772 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL2Q92772 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDKL2Q92772 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL2Q92772 AP002383.4-201ENST00000442518 975 ntBASIC17.09■□□□□ 0.33
CDKL2Q92772 HLA-J-202ENST00000469281 1241 ntBASIC17.09■□□□□ 0.33
CDKL2Q92772 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.09■□□□□ 0.33
CDKL2Q92772 AC092329.2-201ENST00000598402 547 ntBASIC17.09■□□□□ 0.33
CDKL2Q92772 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.09■□□□□ 0.33
CDKL2Q92772 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CDKL2Q92772 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKL2Q92772 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL2Q92772 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKL2Q92772 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL2Q92772 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CDKL2Q92772 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDKL2Q92772 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.09■□□□□ 0.33
CDKL2Q92772 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKL2Q92772 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDKL2Q92772 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDKL2Q92772 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDKL2Q92772 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDKL2Q92772 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDKL2Q92772 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDKL2Q92772 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.08■□□□□ 0.33
CDKL2Q92772 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDKL2Q92772 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDKL2Q92772 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDKL2Q92772 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CDKL2Q92772 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL2Q92772 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.08■□□□□ 0.32
CDKL2Q92772 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL2Q92772 LINC00895-201ENST00000629028 1637 ntBASIC17.08■□□□□ 0.32
CDKL2Q92772 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL2Q92772 IER3-202ENST00000376377 1350 ntBASIC17.08■□□□□ 0.32
CDKL2Q92772 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL2Q92772 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL2Q92772 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL2Q92772 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL2Q92772 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CDKL2Q92772 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.08■□□□□ 0.32
CDKL2Q92772 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.08■□□□□ 0.32
CDKL2Q92772 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.08■□□□□ 0.32
CDKL2Q92772 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.08■□□□□ 0.32
CDKL2Q92772 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL2Q92772 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL2Q92772 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CDKL2Q92772 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CDKL2Q92772 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL2Q92772 AC026691.1-201ENST00000602502 2017 ntBASIC17.08■□□□□ 0.32
CDKL2Q92772 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL2Q92772 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDKL2Q92772 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL2Q92772 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CDKL2Q92772 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL2Q92772 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL2Q92772 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL2Q92772 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL2Q92772 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL2Q92772 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.07■□□□□ 0.32
CDKL2Q92772 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.07■□□□□ 0.32
CDKL2Q92772 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL2Q92772 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.07■□□□□ 0.32
CDKL2Q92772 AP002414.1-201ENST00000391405 1147 ntBASIC17.07■□□□□ 0.32
CDKL2Q92772 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.07■□□□□ 0.32
CDKL2Q92772 LINC00982-205ENST00000420957 435 ntBASIC17.07■□□□□ 0.32
CDKL2Q92772 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.07■□□□□ 0.32
CDKL2Q92772 ABCD1P5-201ENST00000445663 754 ntBASIC17.07■□□□□ 0.32
CDKL2Q92772 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.07■□□□□ 0.32
CDKL2Q92772 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL2Q92772 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.07■□□□□ 0.32
CDKL2Q92772 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.07■□□□□ 0.32
CDKL2Q92772 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL2Q92772 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CDKL2Q92772 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL2Q92772 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.07■□□□□ 0.32
CDKL2Q92772 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL2Q92772 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CDKL2Q92772 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL2Q92772 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL2Q92772 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CDKL2Q92772 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL2Q92772 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL2Q92772 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL2Q92772 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.07■□□□□ 0.32
CDKL2Q92772 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL2Q92772 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms