Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 SAPCD2P3-201ENST00000455031 850 ntBASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 SART3-203ENST00000546611 1184 ntBASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 MTDHP4-201ENST00000600287 670 ntBASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP1Q8TDR0 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 CLEC4GP1-201ENST00000596555 870 ntBASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 AC012313.10-201ENST00000623509 926 ntBASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAF3IP1Q8TDR0 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms