Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 COX5BP2-201ENST00000392354 334 ntBASIC12.67□□□□□ -0.38
NUP35Q8NFH5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 AL355802.2-201ENST00000402069 882 ntBASIC12.67□□□□□ -0.38
NUP35Q8NFH5 CCR12P-201ENST00000446203 998 ntBASIC12.67□□□□□ -0.38
NUP35Q8NFH5 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NUP35Q8NFH5 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 AP005117.1-202ENST00000581724 1908 ntBASIC12.66□□□□□ -0.38
NUP35Q8NFH5 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 HLA-L-209ENST00000420110 1011 ntBASIC12.66□□□□□ -0.38
NUP35Q8NFH5 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 C1QBPP2-201ENST00000528754 825 ntBASIC12.66□□□□□ -0.38
NUP35Q8NFH5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NUP35Q8NFH5 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC12.65□□□□□ -0.38
NUP35Q8NFH5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms