Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 AC025580.3-201ENST00000617932 1424 ntBASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 BCAR1-209ENST00000546196 1340 ntBASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 AL513190.1-201ENST00000621254 727 ntBASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 AP001350.2-201ENST00000625104 1094 ntBASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 AC007064.4-201ENST00000637740 555 ntBASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 OR6D1P-202ENST00000641007 5290 ntBASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC4Q8N9L1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 AL031432.2-201ENST00000566714 459 ntBASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 AL928711.1-201ENST00000570165 459 ntBASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
ZIC4Q8N9L1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.89□□□□□ -0.03
ZIC4Q8N9L1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.89□□□□□ -0.03
ZIC4Q8N9L1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC4Q8N9L1 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC4Q8N9L1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.89□□□□□ -0.03
ZIC4Q8N9L1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC4Q8N9L1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC4Q8N9L1 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC4Q8N9L1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC4Q8N9L1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC4Q8N9L1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC4Q8N9L1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.89□□□□□ -0.03
ZIC4Q8N9L1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC4Q8N9L1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC4Q8N9L1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC4Q8N9L1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC4Q8N9L1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC4Q8N9L1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC4Q8N9L1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.89□□□□□ -0.03
ZIC4Q8N9L1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC4Q8N9L1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ZIC4Q8N9L1 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.89□□□□□ -0.03
ZIC4Q8N9L1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.89□□□□□ -0.03
ZIC4Q8N9L1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms