Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 AC243591.1-201ENST00000452967 1364 ntBASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 ELK2BP-201ENST00000415014 1224 ntBASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 EGFEM1P-202ENST00000431685 1563 ntBASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf42Q8N5U0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 PTCHD3P3-201ENST00000403073 906 ntBASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 LINC02012-201ENST00000608206 1725 ntBASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.11□□□□□ -0.15
C11orf42Q8N5U0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms