Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 AC142381.1-201ENST00000426099 345 ntBASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 AC241585.1-201ENST00000433527 519 ntBASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 AC004890.2-204ENST00000481968 304 ntBASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS3Q8IXF0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
NPAS3Q8IXF0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.39■□□□□ 0.38
NPAS3Q8IXF0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.39■□□□□ 0.38
NPAS3Q8IXF0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
NPAS3Q8IXF0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NPAS3Q8IXF0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.39■□□□□ 0.37
NPAS3Q8IXF0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS3Q8IXF0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS3Q8IXF0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS3Q8IXF0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS3Q8IXF0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
NPAS3Q8IXF0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS3Q8IXF0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.39■□□□□ 0.37
NPAS3Q8IXF0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.39■□□□□ 0.37
NPAS3Q8IXF0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.39■□□□□ 0.37
NPAS3Q8IXF0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.39■□□□□ 0.37
NPAS3Q8IXF0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.39■□□□□ 0.37
NPAS3Q8IXF0 CYP2A7P1-201ENST00000595391 815 ntBASIC17.39■□□□□ 0.37
NPAS3Q8IXF0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS3Q8IXF0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.39■□□□□ 0.37
NPAS3Q8IXF0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS3Q8IXF0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS3Q8IXF0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS3Q8IXF0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.39■□□□□ 0.37
NPAS3Q8IXF0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS3Q8IXF0 AC016396.2-201ENST00000562575 1417 ntBASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 KRT8P49-201ENST00000604166 1432 ntBASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 AC021097.1-201ENST00000607902 574 ntBASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 AC073592.8-201ENST00000624126 511 ntBASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 LINC00895-201ENST00000629028 1637 ntBASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 LINC00896-202ENST00000609602 2128 ntBASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NPAS3Q8IXF0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 FRMD8P1-201ENST00000440433 1524 ntBASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 MRPS18AP1-201ENST00000414458 589 ntBASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 CRB3P1-201ENST00000449338 276 ntBASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 GAPDHP21-201ENST00000450301 1010 ntBASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 SERBP1P5-201ENST00000510079 1181 ntBASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 AC105233.2-201ENST00000523697 349 ntBASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 AF228730.5-201ENST00000530288 346 ntBASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms