Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 FLJ16779-201ENST00000612722 7638 ntBASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 MIR662-201ENST00000384847 95 ntBASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 AC092647.4-201ENST00000457211 535 ntBASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 HLA-J-202ENST00000469281 1241 ntBASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 AC022616.7-201ENST00000525383 220 ntBASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 AC005052.1-201ENST00000625181 2492 ntBASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM42Q8IWZ5 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 STARP1-201ENST00000397973 869 ntBASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 STK19B-204ENST00000512515 211 ntBASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms