Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.13■□□□□ 0.33
DENND4AQ7Z401 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.13■□□□□ 0.33
DENND4AQ7Z401 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DENND4AQ7Z401 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.13■□□□□ 0.33
DENND4AQ7Z401 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DENND4AQ7Z401 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DENND4AQ7Z401 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
DENND4AQ7Z401 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DENND4AQ7Z401 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
DENND4AQ7Z401 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DENND4AQ7Z401 RN7SL618P-201ENST00000477850 296 ntBASIC17.13■□□□□ 0.33
DENND4AQ7Z401 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.13■□□□□ 0.33
DENND4AQ7Z401 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DENND4AQ7Z401 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
DENND4AQ7Z401 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.13■□□□□ 0.33
DENND4AQ7Z401 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.13■□□□□ 0.33
DENND4AQ7Z401 MPDU1-223ENST00000582151 728 ntBASIC17.13■□□□□ 0.33
DENND4AQ7Z401 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.13■□□□□ 0.33
DENND4AQ7Z401 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DENND4AQ7Z401 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
DENND4AQ7Z401 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DENND4AQ7Z401 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
DENND4AQ7Z401 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
DENND4AQ7Z401 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DENND4AQ7Z401 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DENND4AQ7Z401 KRT8P12-202ENST00000472924 1397 ntBASIC17.13■□□□□ 0.33
DENND4AQ7Z401 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 AC124947.2-201ENST00000547118 1133 ntBASIC17.12■□□□□ 0.33
DENND4AQ7Z401 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.12■□□□□ 0.33
DENND4AQ7Z401 AC008735.3-201ENST00000596646 500 ntBASIC17.12■□□□□ 0.33
DENND4AQ7Z401 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 AC114501.2-201ENST00000439631 535 ntBASIC17.11■□□□□ 0.33
DENND4AQ7Z401 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 AC061975.2-201ENST00000581722 295 ntBASIC17.11■□□□□ 0.33
DENND4AQ7Z401 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 AC099568.2-201ENST00000609194 695 ntBASIC17.11■□□□□ 0.33
DENND4AQ7Z401 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
DENND4AQ7Z401 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DENND4AQ7Z401 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms