Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 OR6D1P-202ENST00000641007 5290 ntBASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 AC040169.1-201ENST00000565382 521 ntBASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 KRT18P13-201ENST00000400056 1290 ntBASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 AL513190.1-201ENST00000621254 727 ntBASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 AC002310.6-201ENST00000624451 1377 ntBASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
RFWD3Q6PCD5 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 AC008741.2-201ENST00000612792 3115 ntBASIC17.61■□□□□ 0.41
RFWD3Q6PCD5 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 AC106886.4-201ENST00000623557 2502 ntBASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 AC004877.2-201ENST00000623941 599 ntBASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms