Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 AC064836.3-201ENST00000607928 673 ntBASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 KRT18P3-201ENST00000451602 1288 ntBASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 AC087163.2-201ENST00000457299 853 ntBASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 UBALD1-205ENST00000590891 2641 ntBASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TTC39BQ5VTQ0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 AC005915.1-201ENST00000624912 2018 ntBASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 LINC02012-201ENST00000608206 1725 ntBASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 PMS2P7-201ENST00000506558 1336 ntBASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.59■□□□□ 0.41
TTC39BQ5VTQ0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TTC39BQ5VTQ0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TTC39BQ5VTQ0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TTC39BQ5VTQ0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TTC39BQ5VTQ0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TTC39BQ5VTQ0 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TTC39BQ5VTQ0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms