Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
DCAF4L1Q3SXM0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
DCAF4L1Q3SXM0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DCAF4L1Q3SXM0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 AC027612.4-201ENST00000605371 583 ntBASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
DCAF4L1Q3SXM0 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.21■□□□□ 0.5
DCAF4L1Q3SXM0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.21■□□□□ 0.5
DCAF4L1Q3SXM0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 AC060834.1-201ENST00000443027 2032 ntBASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 PCDHB17P-201ENST00000539533 2393 ntBASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 KRT18P28-201ENST00000453838 1332 ntBASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DCAF4L1Q3SXM0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.19■□□□□ 0.5
DCAF4L1Q3SXM0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
DCAF4L1Q3SXM0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
DCAF4L1Q3SXM0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DCAF4L1Q3SXM0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DCAF4L1Q3SXM0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DCAF4L1Q3SXM0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.19■□□□□ 0.5
DCAF4L1Q3SXM0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DCAF4L1Q3SXM0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.19■□□□□ 0.5
DCAF4L1Q3SXM0 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.19■□□□□ 0.5
DCAF4L1Q3SXM0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
DCAF4L1Q3SXM0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.19■□□□□ 0.5
DCAF4L1Q3SXM0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DCAF4L1Q3SXM0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DCAF4L1Q3SXM0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DCAF4L1Q3SXM0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DCAF4L1Q3SXM0 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
DCAF4L1Q3SXM0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DCAF4L1Q3SXM0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DCAF4L1Q3SXM0 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
DCAF4L1Q3SXM0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DCAF4L1Q3SXM0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms