Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TRIM71Q2Q1W2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM71Q2Q1W2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM71Q2Q1W2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM71Q2Q1W2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRIM71Q2Q1W2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 SPTLC1P1-201ENST00000447199 261 ntBASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 AC009118.2-201ENST00000613275 655 ntBASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 AC025048.6-201ENST00000634326 1161 ntBASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM71Q2Q1W2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 GK-202ENST00000378941 458 ntTSL 3 BASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 PIN1P1-201ENST00000412108 996 ntBASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 AC009477.1-201ENST00000452936 217 ntBASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 PRYP6-201ENST00000514804 343 ntBASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 NOC2LP1-202ENST00000452600 2235 ntBASIC18.27■□□□□ 0.52
TRIM71Q2Q1W2 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM71Q2Q1W2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM71Q2Q1W2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.27■□□□□ 0.51
TRIM71Q2Q1W2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM71Q2Q1W2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM71Q2Q1W2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM71Q2Q1W2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM71Q2Q1W2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM71Q2Q1W2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM71Q2Q1W2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 AL390961.4-201ENST00000623958 2535 ntBASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 HLA-H-201ENST00000383620 1096 ntBASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 AC009407.1-201ENST00000568958 598 ntBASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms