Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.65■□□□□ 0.74
CCDC96Q2M329 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC96Q2M329 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC96Q2M329 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CCDC96Q2M329 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC96Q2M329 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC96Q2M329 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
CCDC96Q2M329 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC96Q2M329 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC96Q2M329 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC96Q2M329 SLC22A20-204ENST00000530038 1673 ntBASIC19.65■□□□□ 0.74
CCDC96Q2M329 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC96Q2M329 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC96Q2M329 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC96Q2M329 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC96Q2M329 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC96Q2M329 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC96Q2M329 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC96Q2M329 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC96Q2M329 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC96Q2M329 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC96Q2M329 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC96Q2M329 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC96Q2M329 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC96Q2M329 AC002056.1-201ENST00000395613 760 ntBASIC19.64■□□□□ 0.73
CCDC96Q2M329 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CCDC96Q2M329 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.64■□□□□ 0.73
CCDC96Q2M329 AC140658.5-201ENST00000438532 169 ntBASIC19.64■□□□□ 0.73
CCDC96Q2M329 ACTG1P14-201ENST00000446382 1122 ntBASIC19.64■□□□□ 0.73
CCDC96Q2M329 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC96Q2M329 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC96Q2M329 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC96Q2M329 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC96Q2M329 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
CCDC96Q2M329 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC96Q2M329 AC091167.2-201ENST00000579581 588 ntBASIC19.64■□□□□ 0.73
CCDC96Q2M329 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC96Q2M329 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC96Q2M329 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
CCDC96Q2M329 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC96Q2M329 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC96Q2M329 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC96Q2M329 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC96Q2M329 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC96Q2M329 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC96Q2M329 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC96Q2M329 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC96Q2M329 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC96Q2M329 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC96Q2M329 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC96Q2M329 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC96Q2M329 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CCDC96Q2M329 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC96Q2M329 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC96Q2M329 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC96Q2M329 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CCDC96Q2M329 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC96Q2M329 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC96Q2M329 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC96Q2M329 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
CCDC96Q2M329 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC96Q2M329 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC96Q2M329 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC96Q2M329 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC96Q2M329 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC96Q2M329 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC96Q2M329 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CCDC96Q2M329 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC96Q2M329 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC96Q2M329 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC96Q2M329 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC96Q2M329 KRT8P49-201ENST00000604166 1432 ntBASIC19.63■□□□□ 0.73
CCDC96Q2M329 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC96Q2M329 AC254562.1-201ENST00000417586 456 ntBASIC19.63■□□□□ 0.73
CCDC96Q2M329 CNN2P11-201ENST00000429351 262 ntBASIC19.63■□□□□ 0.73
CCDC96Q2M329 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC96Q2M329 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC96Q2M329 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC96Q2M329 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC96Q2M329 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC96Q2M329 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC96Q2M329 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC96Q2M329 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC96Q2M329 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC96Q2M329 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
CCDC96Q2M329 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC96Q2M329 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC96Q2M329 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC96Q2M329 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC96Q2M329 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC96Q2M329 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC96Q2M329 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC96Q2M329 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.62■□□□□ 0.73
CCDC96Q2M329 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC96Q2M329 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC96Q2M329 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC96Q2M329 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC96Q2M329 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC96Q2M329 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC96Q2M329 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms