Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.07■□□□□ 0.32
CDH17Q12864 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH17Q12864 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.07■□□□□ 0.32
CDH17Q12864 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.07■□□□□ 0.32
CDH17Q12864 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CDH17Q12864 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CDH17Q12864 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
CDH17Q12864 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
CDH17Q12864 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH17Q12864 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH17Q12864 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH17Q12864 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH17Q12864 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH17Q12864 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH17Q12864 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH17Q12864 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CDH17Q12864 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH17Q12864 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH17Q12864 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH17Q12864 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH17Q12864 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH17Q12864 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH17Q12864 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
CDH17Q12864 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH17Q12864 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH17Q12864 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CDH17Q12864 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH17Q12864 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CDH17Q12864 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH17Q12864 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CDH17Q12864 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH17Q12864 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CDH17Q12864 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH17Q12864 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.06■□□□□ 0.32
CDH17Q12864 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH17Q12864 EMBP1-201ENST00000458200 901 ntBASIC17.06■□□□□ 0.32
CDH17Q12864 RNPS1P1-201ENST00000507437 918 ntBASIC17.06■□□□□ 0.32
CDH17Q12864 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH17Q12864 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.06■□□□□ 0.32
CDH17Q12864 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.06■□□□□ 0.32
CDH17Q12864 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.06■□□□□ 0.32
CDH17Q12864 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.06■□□□□ 0.32
CDH17Q12864 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.06■□□□□ 0.32
CDH17Q12864 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH17Q12864 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH17Q12864 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH17Q12864 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CDH17Q12864 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.06■□□□□ 0.32
CDH17Q12864 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH17Q12864 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CDH17Q12864 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH17Q12864 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH17Q12864 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CDH17Q12864 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CDH17Q12864 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH17Q12864 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH17Q12864 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH17Q12864 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH17Q12864 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH17Q12864 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH17Q12864 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH17Q12864 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH17Q12864 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH17Q12864 AC073621.1-201ENST00000392730 636 ntBASIC17.05■□□□□ 0.32
CDH17Q12864 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH17Q12864 DUSP5P1-201ENST00000441325 1139 ntBASIC17.05■□□□□ 0.32
CDH17Q12864 RPS15P9-201ENST00000494093 319 ntBASIC17.05■□□□□ 0.32
CDH17Q12864 AC136632.2-201ENST00000512891 861 ntBASIC17.05■□□□□ 0.32
CDH17Q12864 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH17Q12864 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH17Q12864 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH17Q12864 AL121912.1-201ENST00000603683 238 ntBASIC17.05■□□□□ 0.32
CDH17Q12864 GGTLC5P-201ENST00000617623 998 ntBASIC17.05■□□□□ 0.32
CDH17Q12864 REXO1L3P-201ENST00000622202 1288 ntBASIC17.05■□□□□ 0.32
CDH17Q12864 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH17Q12864 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH17Q12864 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH17Q12864 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH17Q12864 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH17Q12864 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH17Q12864 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH17Q12864 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH17Q12864 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH17Q12864 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.04■□□□□ 0.32
CDH17Q12864 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH17Q12864 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH17Q12864 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH17Q12864 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDH17Q12864 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CDH17Q12864 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH17Q12864 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH17Q12864 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH17Q12864 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH17Q12864 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH17Q12864 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH17Q12864 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CDH17Q12864 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
CDH17Q12864 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDH17Q12864 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH17Q12864 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms