Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.4■□□□□ 0.38
SCAPQ12770 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.4■□□□□ 0.38
SCAPQ12770 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.4■□□□□ 0.38
SCAPQ12770 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAPQ12770 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAPQ12770 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCAPQ12770 AC012569.1-201ENST00000591191 1524 ntBASIC17.4■□□□□ 0.38
SCAPQ12770 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SCAPQ12770 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCAPQ12770 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.4■□□□□ 0.38
SCAPQ12770 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.4■□□□□ 0.38
SCAPQ12770 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCAPQ12770 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SCAPQ12770 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.4■□□□□ 0.38
SCAPQ12770 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAPQ12770 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAPQ12770 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.4■□□□□ 0.38
SCAPQ12770 KRT8P39-201ENST00000396270 1433 ntBASIC17.39■□□□□ 0.38
SCAPQ12770 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
SCAPQ12770 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCAPQ12770 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.39■□□□□ 0.37
SCAPQ12770 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAPQ12770 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SCAPQ12770 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SCAPQ12770 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAPQ12770 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAPQ12770 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAPQ12770 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAPQ12770 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAPQ12770 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAPQ12770 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAPQ12770 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SCAPQ12770 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCAPQ12770 FAM8A3P-201ENST00000427218 844 ntBASIC17.39■□□□□ 0.37
SCAPQ12770 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.39■□□□□ 0.37
SCAPQ12770 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
SCAPQ12770 RFPL4AP1-201ENST00000530883 850 ntBASIC17.39■□□□□ 0.37
SCAPQ12770 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SCAPQ12770 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.39■□□□□ 0.37
SCAPQ12770 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.39■□□□□ 0.37
SCAPQ12770 AC002347.1-201ENST00000569543 541 ntBASIC17.39■□□□□ 0.37
SCAPQ12770 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.39■□□□□ 0.37
SCAPQ12770 AL596442.2-201ENST00000610240 980 ntBASIC17.39■□□□□ 0.37
SCAPQ12770 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.39■□□□□ 0.37
SCAPQ12770 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAPQ12770 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.39■□□□□ 0.37
SCAPQ12770 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SCAPQ12770 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAPQ12770 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAPQ12770 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAPQ12770 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAPQ12770 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAPQ12770 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAPQ12770 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.39■□□□□ 0.37
SCAPQ12770 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.39■□□□□ 0.37
SCAPQ12770 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAPQ12770 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SCAPQ12770 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCAPQ12770 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SCAPQ12770 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCAPQ12770 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
SCAPQ12770 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SCAPQ12770 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAPQ12770 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.38■□□□□ 0.37
SCAPQ12770 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAPQ12770 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAPQ12770 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.38■□□□□ 0.37
SCAPQ12770 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SCAPQ12770 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAPQ12770 KRT18P2-201ENST00000447938 1258 ntBASIC17.38■□□□□ 0.37
SCAPQ12770 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.38■□□□□ 0.37
SCAPQ12770 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.38■□□□□ 0.37
SCAPQ12770 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.38■□□□□ 0.37
SCAPQ12770 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.38■□□□□ 0.37
SCAPQ12770 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCAPQ12770 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.38■□□□□ 0.37
SCAPQ12770 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.38■□□□□ 0.37
SCAPQ12770 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAPQ12770 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAPQ12770 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAPQ12770 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.37■□□□□ 0.37
SCAPQ12770 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCAPQ12770 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAPQ12770 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.37■□□□□ 0.37
SCAPQ12770 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAPQ12770 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCAPQ12770 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCAPQ12770 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAPQ12770 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.37■□□□□ 0.37
SCAPQ12770 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAPQ12770 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.37■□□□□ 0.37
SCAPQ12770 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.37■□□□□ 0.37
SCAPQ12770 AC007967.2-201ENST00000432613 625 ntBASIC17.37■□□□□ 0.37
SCAPQ12770 AL513480.1-201ENST00000451731 511 ntBASIC17.37■□□□□ 0.37
SCAPQ12770 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.37■□□□□ 0.37
SCAPQ12770 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.37■□□□□ 0.37
SCAPQ12770 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCAPQ12770 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
SCAPQ12770 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.37■□□□□ 0.37
SCAPQ12770 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms