Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 AC011840.4-201ENST00000578471 627 ntBASIC15.27■□□□□ 0.04
SLC3A1Q07837 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC3A1Q07837 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.27■□□□□ 0.04
SLC3A1Q07837 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC3A1Q07837 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
SLC3A1Q07837 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC3A1Q07837 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC3A1Q07837 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.27■□□□□ 0.03
SLC3A1Q07837 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SLC3A1Q07837 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC3A1Q07837 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC3A1Q07837 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC3A1Q07837 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SLC3A1Q07837 AC092364.2-201ENST00000596710 2692 ntBASIC15.27■□□□□ 0.03
SLC3A1Q07837 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC3A1Q07837 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.27■□□□□ 0.03
SLC3A1Q07837 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC3A1Q07837 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.27■□□□□ 0.03
SLC3A1Q07837 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC3A1Q07837 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC3A1Q07837 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC3A1Q07837 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC3A1Q07837 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC3A1Q07837 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC3A1Q07837 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC3A1Q07837 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC3A1Q07837 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC3A1Q07837 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC3A1Q07837 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC3A1Q07837 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC3A1Q07837 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC3A1Q07837 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 AC246785.2-201ENST00000432512 513 ntBASIC15.26■□□□□ 0.03
SLC3A1Q07837 LINC00265-3P-201ENST00000447588 903 ntBASIC15.26■□□□□ 0.03
SLC3A1Q07837 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 IGHV3-52-201ENST00000519770 353 ntBASIC15.26■□□□□ 0.03
SLC3A1Q07837 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 AC109462.3-201ENST00000573934 613 ntBASIC15.26■□□□□ 0.03
SLC3A1Q07837 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 AL592071.1-201ENST00000611956 408 ntBASIC15.26■□□□□ 0.03
SLC3A1Q07837 AC124864.1-201ENST00000623408 392 ntBASIC15.26■□□□□ 0.03
SLC3A1Q07837 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC3A1Q07837 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC3A1Q07837 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC3A1Q07837 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC3A1Q07837 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC3A1Q07837 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC3A1Q07837 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC3A1Q07837 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC3A1Q07837 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC3A1Q07837 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC3A1Q07837 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SLC3A1Q07837 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC3A1Q07837 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC3A1Q07837 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC3A1Q07837 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC3A1Q07837 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC3A1Q07837 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC3A1Q07837 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC3A1Q07837 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC3A1Q07837 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SLC3A1Q07837 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC3A1Q07837 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC3A1Q07837 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC3A1Q07837 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SLC3A1Q07837 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
SLC3A1Q07837 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC3A1Q07837 AP002383.4-201ENST00000442518 975 ntBASIC15.25■□□□□ 0.03
SLC3A1Q07837 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC3A1Q07837 AC012615.1-201ENST00000565797 1299 ntBASIC15.25■□□□□ 0.03
SLC3A1Q07837 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC3A1Q07837 PRELID1P1-202ENST00000567272 903 ntBASIC15.25■□□□□ 0.03
SLC3A1Q07837 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC3A1Q07837 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC3A1Q07837 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC3A1Q07837 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms