Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
RPL39P62891 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12□□□□□ -0.49
RPL39P62891 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPL39P62891 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC11.99□□□□□ -0.49
RPL39P62891 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC11.99□□□□□ -0.49
RPL39P62891 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC11.99□□□□□ -0.49
RPL39P62891 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
RPL39P62891 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC11.99□□□□□ -0.49
RPL39P62891 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPL39P62891 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPL39P62891 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
RPL39P62891 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RPL39P62891 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPL39P62891 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPL39P62891 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPL39P62891 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
RPL39P62891 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPL39P62891 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC11.99□□□□□ -0.49
RPL39P62891 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RPL39P62891 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPL39P62891 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC11.99□□□□□ -0.49
RPL39P62891 AC007967.3-201ENST00000434308 558 ntBASIC11.99□□□□□ -0.49
RPL39P62891 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC11.99□□□□□ -0.49
RPL39P62891 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC11.99□□□□□ -0.49
RPL39P62891 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC11.99□□□□□ -0.49
RPL39P62891 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC11.99□□□□□ -0.49
RPL39P62891 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC11.99□□□□□ -0.49
RPL39P62891 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC11.99□□□□□ -0.49
RPL39P62891 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
RPL39P62891 SNX21-213ENST00000614929 587 ntTSL 5 BASIC11.99□□□□□ -0.49
RPL39P62891 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC11.99□□□□□ -0.49
RPL39P62891 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC11.99□□□□□ -0.49
RPL39P62891 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPL39P62891 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RPL39P62891 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
RPL39P62891 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPL39P62891 MTHFR-217ENST00000641820 1569 ntBASIC11.99□□□□□ -0.49
RPL39P62891 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC11.99□□□□□ -0.49
RPL39P62891 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPL39P62891 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPL39P62891 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RPL39P62891 AL135999.2-201ENST00000622438 1686 ntBASIC11.99□□□□□ -0.49
RPL39P62891 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC11.99□□□□□ -0.49
RPL39P62891 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RPL39P62891 AMT-206ENST00000458307 1860 ntTSL 2 BASIC11.99□□□□□ -0.49
RPL39P62891 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC11.99□□□□□ -0.49
RPL39P62891 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPL39P62891 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
RPL39P62891 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
RPL39P62891 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
RPL39P62891 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC11.99□□□□□ -0.49
RPL39P62891 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
RPL39P62891 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPL39P62891 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC11.99□□□□□ -0.49
RPL39P62891 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
RPL39P62891 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPL39P62891 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPL39P62891 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPL39P62891 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RPL39P62891 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
RPL39P62891 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPL39P62891 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RPL39P62891 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
RPL39P62891 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RPL39P62891 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RPL39P62891 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
RPL39P62891 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC11.98□□□□□ -0.49
RPL39P62891 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RPL39P62891 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPL39P62891 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPL39P62891 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPL39P62891 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC11.98□□□□□ -0.49
RPL39P62891 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
RPL39P62891 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC11.98□□□□□ -0.49
RPL39P62891 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
RPL39P62891 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC11.98□□□□□ -0.49
RPL39P62891 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
RPL39P62891 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPL39P62891 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPL39P62891 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPL39P62891 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPL39P62891 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
RPL39P62891 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPL39P62891 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
RPL39P62891 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC11.98□□□□□ -0.49
RPL39P62891 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC11.98□□□□□ -0.49
RPL39P62891 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
RPL39P62891 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
RPL39P62891 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RPL39P62891 MIR718-201ENST00000390190 70 ntBASIC11.98□□□□□ -0.49
RPL39P62891 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
RPL39P62891 CRAT-202ENST00000393384 973 ntTSL 2 BASIC11.98□□□□□ -0.49
RPL39P62891 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC11.98□□□□□ -0.49
RPL39P62891 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
RPL39P62891 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC11.98□□□□□ -0.49
RPL39P62891 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RPL39P62891 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC11.98□□□□□ -0.49
RPL39P62891 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPL39P62891 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RPL39P62891 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms